RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 CYP39A1Q9NYL5 469 aa13.58□□□□□ -0.24
EXOSC9-202ENST00000379663 FBXO40Q9UH90 709 aa13.58□□□□□ -0.24
EXOSC9-202ENST00000379663 FAM155AB1AL88 458 aaPredicted RBP13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 PEX10O60683 326 aa13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 COPB2P35606 906 aa13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 SYKP43405 635 aa13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 ZNF157P51786 506 aaPredicted RBP13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 MKRN3Q13064 507 aaKnown RBP13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 PLS1Q14651 629 aa13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 SPECC1Q5M775 1068 aa13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 FAM43AQ8N2R8 423 aa13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 EPSTI1Q96J88 318 aa13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 MOV10L1Q9BXT6 1211 aaKnown RBP13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 FAM13BQ9NYF5 915 aa13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 KCNH3Q9ULD8 1083 aa13.57□□□□□ -0.24
EXOSC9-202ENST00000379663 PFASO15067 1338 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 MANSC4A6NHS7 340 aaPredicted RBP13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 KINO60870 393 aaKnown RBP13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 ZNF202O95125 648 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 SLC25A27O95847 323 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 CYP2C8P10632 490 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 ERVK-9P63128 1117 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 ERVK-24P63145 666 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 PCNX4Q63HM2 1172 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 NSMFQ6X4W1 530 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 IL31RAQ8NI17 732 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 TAAR1Q96RJ0 339 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 PAGR1Q9BTK6 254 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 PXMP2Q9NR77 195 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 MYH9P35579 1960 aaKnown RBP13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 ADGRA2Q96PE1 1338 aa13.56□□□□□ -0.24
EXOSC9-202ENST00000379663 THSD7BQ9C0I4 1608 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 A0A087X0B3 334 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 SETQ01105 290 aaPredicted RBP13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 FSTL1Q12841 308 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 PDIA5Q14554 519 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 PGM5Q15124 567 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 CEP55Q53EZ4 464 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 PRR16Q569H4 304 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 NIPA1Q7RTP0 329 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 ELOA2Q8IYF1 753 aaPredicted RBP13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 SLFN12Q8IYM2 578 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 SHCBP1Q8NEM2 672 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 CYP2W1Q8TAV3 490 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 PDCD2LQ9BRP1 358 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 MORF4L1Q9UBU8 362 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 ARID2Q68CP9 1835 aa13.55□□□□□ -0.24
EXOSC9-202ENST00000379663 SYCE3A1L190 88 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 TMEM88BA6NKF7 163 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 MEIS1O00470 390 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 LETM1O95202 739 aaPredicted RBP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 BCRP11274 1271 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 ERCC3P19447 782 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 GCLCP48506 637 aaPredicted RBP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 UBXN2AP68543 259 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 MRPS9P82933 396 aaKnown RBP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 E2F4Q16254 413 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 Q3C1V9 767 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 SMCR8Q8TEV9 937 aaPredicted RBP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 FAM20AQ96MK3 541 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 RMDN3Q96TC7 470 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 PARK7Q99497 189 aaKnown RBP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 TNMDQ9H2S6 317 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 TTC12Q9H892 705 aaPredicted RBP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 ASTN1O14525 1302 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 IGF2BP3O00425 579 aaKnown RBP eCLIP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 CTAGE5O15320 804 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 MSH4O15457 936 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 POLR2DO15514 142 aaKnown RBP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 ACTN4O43707 911 aaKnown RBP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 ITGB5P18084 799 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 TXKP42681 527 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 TMEM266Q2M3C6 531 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 XRRA1Q6P2D8 792 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 KRBA2Q6ZNG9 492 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 DNERQ8NFT8 737 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 PURBQ96QR8 312 aaKnown RBP13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 MXRA8Q9BRK3 442 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 FUCA2Q9BTY2 467 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 R3HDMLQ9H3Y0 253 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 MROH8Q9H579 483 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 UBIAD1Q9Y5Z9 338 aa13.54□□□□□ -0.24
EXOSC9-202ENST00000379663 MYH11P35749 1972 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 POTEMA6NI47 508 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 PP2D1A8MPX8 630 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 ZNF76P36508 570 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 TECP42680 631 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 CAMK4Q16566 473 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 LONRF3Q496Y0 759 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 LRSAM1Q6UWE0 723 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 VSIG10LQ86VR7 867 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 NCAPG2Q86XI2 1143 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 NSUN6Q8TEA1 469 aaKnown RBP13.53□□□□□ -0.24
EXOSC9-202ENST00000379663 SLC5A5Q92911 643 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms