RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 SKIV2LQ15477 1246 aaKnown RBP12.15□□□□□ -0.47
PTCHD1-201ENST00000379361 C2CD5Q86YS7 1000 aa12.15□□□□□ -0.47
PTCHD1-201ENST00000379361 FAM207AQ9NSI2 230 aaPredicted RBP12.15□□□□□ -0.47
PTCHD1-201ENST00000379361 TAB2Q9NYJ8 693 aa12.15□□□□□ -0.47
PTCHD1-201ENST00000379361 TRIOBPQ9H2D6 2365 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 GOLGA8KD6RF30 607 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 RASGRF2O14827 1237 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 RPS6KB1P23443 525 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 MORC3Q14149 939 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 CWF19L2Q2TBE0 894 aaKnown RBP12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 RWDD4Q6NW29 188 aaKnown RBP12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 STK17AQ9UEE5 414 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 CCND2P30279 289 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 TTC19Q6DKK2 380 aaPredicted RBP12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 ZNF526Q8TF50 670 aaPredicted RBP12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 U2AF1L4Q8WU68 220 aaKnown RBP12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 CCDC51Q96ER9 411 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 CFAP36Q96G28 342 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 ABCF3Q9NUQ8 709 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 ZFP42Q96MM3 310 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 PTK2Q05397 1052 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 CDHR1Q96JP9 859 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 SEC16AO15027 2179 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 TAC1P20366 129 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 USP14P54578 494 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 OCRLQ01968 901 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 DDX50Q9BQ39 737 aaKnown RBP12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 TXLNGQ9NUQ3 528 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 BTG4Q9NY30 223 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 IREB2P48200 963 aaKnown RBP12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 MOSPD1Q9UJG1 213 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 FLT4P35916 1363 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 APBA3O96018 575 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 Q3C1V9 767 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 MYOCDQ8IZQ8 938 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 PLBD2Q8NHP8 589 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 SYNDIG1Q9H7V2 258 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 MAP3K10Q02779 954 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 CERKLQ49MI3 558 aaPredicted RBP12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 PIP4K2CQ8TBX8 421 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 BAIAP2L1Q9UHR4 511 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 SH3KBP1Q96B97 665 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 ATP6V0A4Q9HBG4 840 aa12.14□□□□□ -0.47
PTCHD1-201ENST00000379361 OR52Z1P0C646 297 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 KRT4P19013 534 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 FSD1LQ9BXM9 530 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 GFAPP14136 432 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 TAF1BQ53T94 588 aaPredicted RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 LRRD1A4D1F6 860 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 GSNP06396 782 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 TSPY1Q01534 308 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 E4F1Q66K89 784 aaPredicted RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 SMAP1Q8IYB5 467 aaPredicted RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 THEM5Q8N1Q8 247 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 SNX21Q969T3 373 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 MED4Q9NPJ6 270 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 PACSIN2Q9UNF0 486 aaPredicted RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 MEIS1O00470 390 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 MTRQ99707 1265 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 TACO1Q9BSH4 297 aaKnown RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 TUBB6Q9BUF5 446 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 NFE2L3Q9Y4A8 694 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 HSPA1AP0DMV8 641 aaKnown RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 HSPA1BP0DMV9 641 aaKnown RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 SPOPLQ6IQ16 392 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 CHCHD3Q9NX63 227 aaKnown RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 PCF11O94913 1555 aaKnown RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 SERPINI1Q99574 410 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 OLFML3Q9NRN5 406 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 MAP3K15Q6ZN16 1313 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 TBC1D19Q8N5T2 526 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 FTOQ9C0B1 505 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 PIDD1Q9HB75 910 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 COL4A3BPQ9Y5P4 624 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 CAPRIN1Q14444 709 aaKnown RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 CCDC184Q52MB2 194 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 PCDHA12Q9UN75 941 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 NLRP12P59046 1061 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 FANCCQ00597 558 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 EIF2B5Q13144 721 aaKnown RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 RASIP1Q5U651 963 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 SPATS2LQ9NUQ6 558 aaKnown RBP12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 CLCA2Q9UQC9 943 aa12.13□□□□□ -0.47
PTCHD1-201ENST00000379361 MYO1DO94832 1006 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 MXD4Q14582 209 aaPredicted RBP12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 PRPSAP2O60256 369 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 GUCY2FP51841 1108 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 MED21Q13503 144 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 SNCBQ16143 134 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 TRMT10CQ7L0Y3 403 aaKnown RBP12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 DYMQ7RTS9 669 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 KDM2BQ8NHM5 1336 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 KIF21AQ7Z4S6 1674 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 FBXO41Q8TF61 875 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 CARD6Q9BX69 1037 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 ANLNQ9NQW6 1124 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 SNX2O60749 519 aa12.12□□□□□ -0.47
PTCHD1-201ENST00000379361 NELFCDQ8IXH7 590 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms