RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 ALAS1P13196 640 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 PPARGP37231 505 aaPredicted RBP14.36□□□□□ -0.11
HIPK3-202ENST00000379016 CYP4F22Q6NT55 531 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 DARS2Q6PI48 645 aaKnown RBP14.36□□□□□ -0.11
HIPK3-202ENST00000379016 KLHL24Q6TFL4 600 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.36□□□□□ -0.11
HIPK3-202ENST00000379016 CAPS2Q9BXY5 557 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 USE1Q9NZ43 259 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 LRWD1Q9UFC0 647 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 TCP11X2Q5H9J9 407 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 KCTD16Q68DU8 428 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 ZNF507Q8TCN5 953 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 H0YIN7 160 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 SDSP20132 328 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 ALDH1L2Q3SY69 923 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 C11orf74Q86VG3 221 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.36□□□□□ -0.117e-7■■■■□ 22
HIPK3-202ENST00000379016 PIK3R4Q99570 1358 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 LZTS3O60299 673 aaPredicted RBP14.36□□□□□ -0.11
HIPK3-202ENST00000379016 MOCS3O95396 460 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 TFCP2Q12800 502 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 IFT88Q13099 833 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 MESDQ14696 234 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 PIDD1Q9HB75 910 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 TMEM161AQ9NX61 479 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 LRRC74AQ0VAA2 488 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 RBBP7Q16576 425 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 TRAPPC3LQ5T215 181 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 ARMT1Q9H993 441 aa14.36□□□□□ -0.11
HIPK3-202ENST00000379016 NSFP46459 744 aaKnown RBP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 BASP1P80723 227 aaKnown RBP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 FANCCQ00597 558 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 POLR3EQ9NVU0 708 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 SEPT9Q9UHD8 586 aaPredicted RBP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 TAF5LO75529 589 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 ELMSAN1Q6PJG2 1045 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 ELMOD1Q8N336 334 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 C1orf131Q8NDD1 294 aaKnown RBP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 ANKRD36BP1Q96IX9 119 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 SUN2Q9UH99 717 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 FRMPD2Q68DX3 1309 aaPredicted RBP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 KLHL18O94889 574 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 SLC44A4Q53GD3 710 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 CDC37L1Q7L3B6 337 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 MIS12Q9H081 205 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 AP5M1Q9H0R1 490 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 KCNH3Q9ULD8 1083 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 ZNF711Q9Y462 761 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 RNF113AO15541 343 aaKnown RBP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 TRPC1P48995 793 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 STXBP2Q15833 593 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 ZSCAN26Q16670 478 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 TTC38Q5R3I4 469 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 INTS9Q9NV88 658 aaKnown RBP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 BCS1LQ9Y276 419 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 SUPT3HO75486 399 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 GPBP1Q86WP2 473 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 OTUB1Q96FW1 271 aaPredicted RBP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 ASPSCR1Q9BZE9 553 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 FTOQ9C0B1 505 aaKnown RBP eCLIP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 DIABLOQ9NR28 239 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 NDUFB9Q9Y6M9 179 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 GRM8O00222 908 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 DPYSL4O14531 572 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 MCF2LO15068 1137 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 TUBB2AQ13885 445 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 TUBB2BQ9BVA1 445 aa14.35□□□□□ -0.11
HIPK3-202ENST00000379016 FHDC1Q9C0D6 1143 aaPredicted RBP14.35□□□□□ -0.11
HIPK3-202ENST00000379016 KITP10721 976 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 GRK2P25098 689 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 TSPY1Q01534 308 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 ARHGAP27Q6ZUM4 889 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 RPAP3Q9H6T3 665 aaPredicted RBP14.34□□□□□ -0.11
HIPK3-202ENST00000379016 CAPN1P07384 714 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 E4F1Q66K89 784 aaPredicted RBP14.34□□□□□ -0.11
HIPK3-202ENST00000379016 TMTC1Q8IUR5 882 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 NIM1KQ8IY84 436 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 PPARGC1AQ9UBK2 798 aaKnown RBP14.34□□□□□ -0.11
HIPK3-202ENST00000379016 PRG3Q9Y2Y8 225 aaPredicted RBP14.34□□□□□ -0.11
HIPK3-202ENST00000379016 GOLGA8SH3BPF8 625 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 GOLGA8RI6L899 631 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 ARMCX5Q6P1M9 558 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 TRIM69Q86WT6 500 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 BCAS4Q8TDM0 211 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 KPNA2P52292 529 aaKnown RBP14.34□□□□□ -0.11
HIPK3-202ENST00000379016 DPY19L2Q6NUT2 758 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 PGBD3Q8N328 593 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 ULK4Q96C45 1275 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 RUBCNLQ9H714 662 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 POLA1P09884 1462 aaPredicted RBP14.34□□□□□ -0.11
HIPK3-202ENST00000379016 A0A1B0GW55 424 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 SERPINB2P05120 415 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 DUX4L2P0CJ85 424 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 DUX4L3P0CJ86 424 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 DUX4L4P0CJ87 422 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 DUX4L5P0CJ88 424 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 DUX4L6P0CJ89 424 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 DUX4L7P0CJ90 424 aa14.34□□□□□ -0.11
HIPK3-202ENST00000379016 ADKP55263 362 aaKnown RBP14.34□□□□□ -0.11
HIPK3-202ENST00000379016 CCDC15Q0P6D6 951 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms