RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 WDR19Q8NEZ3 1342 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 C21orf2O43822 256 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 N4BP1O75113 896 aaKnown RBP16.45■□□□□ 0.22
NPHP4-201ENST00000378156 MAP2K2P36507 400 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 PDIA6Q15084 440 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 LRRC41Q15345 812 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 LONRF2Q1L5Z9 754 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 SHC4Q6S5L8 630 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.45■□□□□ 0.22
NPHP4-201ENST00000378156 RWDD2AQ9UIY3 292 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 PPFIA4O75335 1185 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 CYP2D6P10635 497 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 GUCY2FP51841 1108 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 SYDE2Q5VT97 1194 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 CCDC127Q96BQ5 260 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 DHTKD1Q96HY7 919 aaPredicted RBP16.45■□□□□ 0.22
NPHP4-201ENST00000378156 SPC25Q9HBM1 224 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 NRBP2Q9NSY0 501 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
NPHP4-201ENST00000378156 FYB2Q5VWT5 728 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 PODNQ7Z5L7 613 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 MIPOL1Q8TD10 442 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 OSBPL5Q9H0X9 879 aaPredicted RBP16.45■□□□□ 0.22
NPHP4-201ENST00000378156 VCXQ9H320 206 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 VCX3BQ9H321 246 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 STK17AQ9UEE5 414 aa16.45■□□□□ 0.22
NPHP4-201ENST00000378156 ABCC12Q96J65 1359 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 A0A0G2JLW4 131 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 FOXN1O15353 648 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 DMP1Q13316 513 aaPredicted RBP16.44■□□□□ 0.22
NPHP4-201ENST00000378156 TMTC3Q6ZXV5 915 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 SPATS2Q86XZ4 545 aaKnown RBP16.44■□□□□ 0.22
NPHP4-201ENST00000378156 FAM204AQ9H8W3 233 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 CD163L1Q9NR16 1453 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 GSG1L2A8MUP6 293 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 KCTD2Q14681 263 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 KRT31Q15323 416 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 MIGA2Q7L4E1 593 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 RNF34Q969K3 372 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 GJD4Q96KN9 370 aaPredicted RBP16.44■□□□□ 0.22
NPHP4-201ENST00000378156 GDAQ9Y2T3 454 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 CPDO75976 1380 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 PRR29P0C7W0 189 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 POLGP54098 1239 aaPredicted RBP16.44■□□□□ 0.22
NPHP4-201ENST00000378156 PARD6BQ9BYG5 372 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 STK36Q9NRP7 1315 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 KCNK3O14649 394 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 ZMYND10O75800 440 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 P4HA1P13674 534 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 TCP1P17987 556 aaKnown RBP16.44■□□□□ 0.22
NPHP4-201ENST00000378156 ABCB4P21439 1286 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 YWHAEP62258 255 aaKnown RBP16.44■□□□□ 0.22
NPHP4-201ENST00000378156 TAOK1Q7L7X3 1001 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 ENAHQ8N8S7 591 aaPredicted RBP16.44■□□□□ 0.22
NPHP4-201ENST00000378156 ATP6V0A1Q93050 837 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 DCP1AQ9NPI6 582 aaPredicted RBP16.44■□□□□ 0.22
NPHP4-201ENST00000378156 ASIC3Q9UHC3 531 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 RIPOR2Q9Y4F9 1068 aa16.44■□□□□ 0.22
NPHP4-201ENST00000378156 MROH2AA6NES4 1674 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 PNMA6FA0A0J9YX94 578 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 LRRIQ4A6NIV6 560 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 MYL1P05976 194 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 RFX5P48382 616 aaPredicted RBP16.43■□□□□ 0.22
NPHP4-201ENST00000378156 MTMR3Q13615 1198 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 ALX1Q15699 326 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 CCDC14Q49A88 953 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 ARHGAP24Q8N264 748 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 BPIFA3Q9BQP9 254 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 DMTNQ08495 405 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 IQCB1Q15051 598 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 CLUL1Q15846 466 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 TOGARAM2Q6ZUX3 1019 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 TMEM179Q6ZVK1 233 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 NMT2O60551 498 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 RASSF7Q02833 373 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 PANX2Q96RD6 677 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 AMFRQ9UKV5 643 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 SALL3Q9BXA9 1300 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 DLATP10515 647 aaKnown RBP16.43■□□□□ 0.22
NPHP4-201ENST00000378156 PLCG1P19174 1290 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 CACNB3P54284 484 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 CUL4BQ13620 913 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 SLC27A3Q5K4L6 730 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 MTA3Q9BTC8 594 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 C1orf112Q9NSG2 853 aa16.43■□□□□ 0.22
NPHP4-201ENST00000378156 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-201ENST00000378156 PPM1FP49593 454 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-201ENST00000378156 CDC37Q16543 378 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-201ENST00000378156 CCDC38Q502W7 563 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 HACE1Q8IYU2 909 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 NR2F2P24468 414 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 GUCY1A2P33402 732 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 FKBP3Q00688 224 aaKnown RBP16.42■□□□□ 0.22
NPHP4-201ENST00000378156 EXOC3L4Q17RC7 722 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 ARL6IP4Q66PJ3 421 aaKnown RBP16.42■□□□□ 0.22
NPHP4-201ENST00000378156 PPM1KQ8N3J5 372 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 KAZALD1Q96I82 304 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 E7EVH7 732 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 CRKP46108 304 aa16.42■□□□□ 0.22
NPHP4-201ENST00000378156 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms