RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 CYP2C9P11712 490 aa20.71■□□□□ 0.91
COMMD6-202ENST00000377612 MRPL12P52815 198 aaKnown RBP20.71■□□□□ 0.91
COMMD6-202ENST00000377612 CCL23P55773 120 aa20.71■□□□□ 0.91
COMMD6-202ENST00000377612 PGM5Q15124 567 aa20.71■□□□□ 0.91
COMMD6-202ENST00000377612 STXBP2Q15833 593 aa20.71■□□□□ 0.91
COMMD6-202ENST00000377612 NBPF20Q3BBV1 942 aa20.71■□□□□ 0.91
COMMD6-202ENST00000377612 ZNF697Q5TEC3 545 aa20.71■□□□□ 0.91
COMMD6-202ENST00000377612 GPKOWQ92917 476 aaPredicted RBP eCLIP20.71■□□□□ 0.91
COMMD6-202ENST00000377612 ZFP91Q96JP5 570 aaPredicted RBP20.71■□□□□ 0.91
COMMD6-202ENST00000377612 DDX41Q9UJV9 622 aaKnown RBP20.71■□□□□ 0.91
COMMD6-202ENST00000377612 CHD7Q9P2D1 2997 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 PNMA6FA0A0J9YX94 578 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 ZNF365Q70YC5 407 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 TMEM199Q8N511 208 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 KAT2BQ92831 832 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 SCLYQ96I15 445 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 CTAGE1Q96RT6 745 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 MTA3Q9BTC8 594 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 SPZ1Q9BXG8 430 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 SEZ6LQ9BYH1 1024 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 IL23AQ9NPF7 189 aa20.7■□□□□ 0.9
COMMD6-202ENST00000377612 COL4A4P53420 1690 aaPredicted RBP20.7■□□□□ 0.9
COMMD6-202ENST00000377612 GRXCR1A8MXD5 290 aa20.69■□□□□ 0.9
COMMD6-202ENST00000377612 GH1P01241 217 aa20.69■□□□□ 0.9
COMMD6-202ENST00000377612 MCM5P33992 734 aa20.69■□□□□ 0.9
COMMD6-202ENST00000377612 CASC1Q6TDU7 716 aa20.69■□□□□ 0.9
COMMD6-202ENST00000377612 CMTR1Q8N1G2 835 aaKnown RBP20.69■□□□□ 0.9
COMMD6-202ENST00000377612 SRBD1Q8N5C6 995 aaKnown RBP20.69■□□□□ 0.9
COMMD6-202ENST00000377612 MAP3K14Q99558 947 aa20.69■□□□□ 0.9
COMMD6-202ENST00000377612 CXXC1Q9P0U4 656 aaPredicted RBP20.69■□□□□ 0.9
COMMD6-202ENST00000377612 LOXHD1Q8IVV2 1947 aa20.68■□□□□ 0.9
COMMD6-202ENST00000377612 EIF3JO75822 258 aaKnown RBP20.68■□□□□ 0.9
COMMD6-202ENST00000377612 MYCLP12524 364 aaPredicted RBP20.68■□□□□ 0.9
COMMD6-202ENST00000377612 PSRC1Q6PGN9 363 aaPredicted RBP20.68■□□□□ 0.9
COMMD6-202ENST00000377612 FCHSD1Q86WN1 690 aa20.68■□□□□ 0.9
COMMD6-202ENST00000377612 CTCFLQ8NI51 663 aaPredicted RBP20.68■□□□□ 0.9
COMMD6-202ENST00000377612 TMEM87BQ96K49 555 aa20.68■□□□□ 0.9
COMMD6-202ENST00000377612 MAP3K20Q9NYL2 800 aaKnown RBP20.68■□□□□ 0.9
COMMD6-202ENST00000377612 GCOM1H8Y6P7 765 aaPredicted RBP20.67■□□□□ 0.9
COMMD6-202ENST00000377612 SORBS3O60504 671 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 POLR2MP0CAP2 368 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 DNAJB2P25686 324 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 PBX2P40425 430 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 FAM47CQ5HY64 1035 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 NFRKBQ6P4R8 1299 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 VSIG10LQ86VR7 867 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 RASEFQ8IZ41 740 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 EMID1Q96A84 441 aaPredicted RBP20.67■□□□□ 0.9
COMMD6-202ENST00000377612 TCEANC2Q96MN5 208 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 CDX2Q99626 313 aaPredicted RBP20.67■□□□□ 0.9
COMMD6-202ENST00000377612 SEMA6BQ9H3T3 888 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 MRVI1Q9Y6F6 885 aa20.67■□□□□ 0.9
COMMD6-202ENST00000377612 KPNA6O60684 536 aa20.66■□□□□ 0.9
COMMD6-202ENST00000377612 ZNF286BP0CG31 522 aa20.66■□□□□ 0.9
COMMD6-202ENST00000377612 UBA1P22314 1058 aaKnown RBP20.66■□□□□ 0.9
COMMD6-202ENST00000377612 LIFRP42702 1097 aa20.66■□□□□ 0.9
COMMD6-202ENST00000377612 SP2Q02086 613 aa20.66■□□□□ 0.9
COMMD6-202ENST00000377612 SEMA3FQ13275 785 aa20.66■□□□□ 0.9
COMMD6-202ENST00000377612 ADCK5Q3MIX3 580 aa20.66■□□□□ 0.9
COMMD6-202ENST00000377612 BRDTQ58F21 947 aaPredicted RBP20.66■□□□□ 0.9
COMMD6-202ENST00000377612 SAMD3Q8N6K7 520 aa20.66■□□□□ 0.9
COMMD6-202ENST00000377612 HERVK_113Q902F9 699 aa20.66■□□□□ 0.9
COMMD6-202ENST00000377612 hCG_1642624A0A1W2PR95 340 aa20.65■□□□□ 0.9
COMMD6-202ENST00000377612 CDC45O75419 566 aa20.65■□□□□ 0.9
COMMD6-202ENST00000377612 HOXD8P13378 290 aaPredicted RBP20.65■□□□□ 0.9
COMMD6-202ENST00000377612 MRPS9P82933 396 aaKnown RBP20.65■□□□□ 0.9
COMMD6-202ENST00000377612 GDF6Q6KF10 455 aaPredicted RBP20.65■□□□□ 0.9
COMMD6-202ENST00000377612 NFXL1Q6ZNB6 911 aa20.65■□□□□ 0.9
COMMD6-202ENST00000377612 BCAS3Q9H6U6 928 aa20.65■□□□□ 0.9
COMMD6-202ENST00000377612 REV3LO60673 3130 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 CNTNAP5Q8WYK1 1306 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.64■□□□□ 0.89
COMMD6-202ENST00000377612 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.64■□□□□ 0.89
COMMD6-202ENST00000377612 CCDC69A6NI79 296 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 F2P00734 622 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 CCND2P30279 289 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 KIF5BP33176 963 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 CHMP4BP1P59074 171 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 HSDL1Q3SXM5 330 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 USP17L6PQ6QN14 398 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 TMTC3Q6ZXV5 915 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 OTOP2Q7RTS6 562 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 SGMS1Q86VZ5 419 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 MICU3Q86XE3 530 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 PPTC7Q8NI37 304 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 MYLIPQ8WY64 445 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 DHX38Q92620 1227 aaKnown RBP20.64■□□□□ 0.89
COMMD6-202ENST00000377612 PBX4Q9BYU1 374 aa20.64■□□□□ 0.89
COMMD6-202ENST00000377612 TMEM265A0A087WTH1 108 aa20.63■□□□□ 0.89
COMMD6-202ENST00000377612 HAS3O00219 553 aa20.63■□□□□ 0.89
COMMD6-202ENST00000377612 MEIS2O14770 477 aa20.63■□□□□ 0.89
COMMD6-202ENST00000377612 GGPS1O95749 300 aa20.63■□□□□ 0.89
COMMD6-202ENST00000377612 SMARCA1P28370 1054 aa20.63■□□□□ 0.89
COMMD6-202ENST00000377612 PTPN11Q06124 597 aaPredicted RBP20.63■□□□□ 0.89
COMMD6-202ENST00000377612 MYSM1Q5VVJ2 828 aa20.63■□□□□ 0.89
COMMD6-202ENST00000377612 SESTD1Q86VW0 696 aa20.63■□□□□ 0.89
COMMD6-202ENST00000377612 RRP36Q96EU6 259 aaKnown RBP20.63■□□□□ 0.89
COMMD6-202ENST00000377612 TELO2Q9Y4R8 837 aa20.63■□□□□ 0.89
COMMD6-202ENST00000377612 SUPT20HL2P0C7V6 817 aa20.62■□□□□ 0.89
COMMD6-202ENST00000377612 PSEN2P49810 448 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms