RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 ATP6V0A2Q9Y487 856 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 GREB1LQ9C091 1923 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 TARSL2A2RTX5 802 aaKnown RBP13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 CCDC66A2RUB6 948 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 ENC1O14682 589 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 SLC26A4O43511 780 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 GCFC2P16383 781 aaKnown RBP13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 MRPL12P52815 198 aaKnown RBP13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 ZCWPW2Q504Y3 356 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 SLC27A3Q5K4L6 730 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 KCNK18Q7Z418 384 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 CERS5Q8N5B7 392 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 SNX29Q8TEQ0 813 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 DDX12PQ92771 950 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 DNAJC19Q96DA6 116 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 MMS19Q96T76 1030 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 ARHGAP20Q9P2F6 1191 aa13.07□□□□□ -0.32
TNFRSF9-201ENST00000377507 ZBTB5O15062 677 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 PRLRP16471 622 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 CKAP4Q07065 602 aaKnown RBP13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 KIF5AQ12840 1032 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 PICALMQ13492 652 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 ECM1Q16610 540 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 HHIPL2Q6UWX4 724 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 DYMQ7RTS9 669 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 CUL5Q93034 780 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 EXOC4Q96A65 974 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 CCDC42Q96M95 316 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 PCMTD1Q96MG8 357 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 EHD4Q9H223 541 aa13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 DDX25Q9UHL0 483 aaKnown RBP13.06□□□□□ -0.32
TNFRSF9-201ENST00000377507 PPEF1O14829 653 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 EPHB6O15197 1021 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 MCM3P25205 808 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 TNNI2P48788 182 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 CYP27A1Q02318 531 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 GPS2Q13227 327 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 CASP8Q14790 479 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 TTBK2Q6IQ55 1244 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 CLEC10AQ8IUN9 316 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 BAP1Q92560 729 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 NAP1L4Q99733 375 aaKnown RBP13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 DUSP10Q9Y6W6 482 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 EIF3JO75822 258 aaKnown RBP13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 PLEKP08567 350 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 SPA17Q15506 151 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 ASTE1Q2TB18 679 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 ZNF572Q7Z3I7 529 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 MKL1Q969V6 931 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 GLT8D2Q9H1C3 349 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 VIPAS39Q9H9C1 493 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 SUGCTQ9HAC7 445 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 PDE11AQ9HCR9 933 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 USP40Q9NVE5 1235 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 ADAM21Q9UKJ8 722 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 JRKLQ9Y4A0 524 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 PCDHA13Q9Y5I0 950 aa13.05□□□□□ -0.32
TNFRSF9-201ENST00000377507 CYP3A7-CYP3A51PA0A087WV96 503 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 USP17L10C9JJH3 530 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 PJA2O43164 708 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 SRGAP2O75044 1071 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 CYP3A7P24462 503 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 FKBP3Q00688 224 aaKnown RBP13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 ITIH3Q06033 890 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 UBE2SQ16763 222 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 APOBEC3HQ6NTF7 200 aaKnown RBP13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 CDC42EP5Q6NZY7 148 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 MYOCDQ8IZQ8 938 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 TXLNBQ8N3L3 684 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 SECISBP2LQ93073 1101 aaKnown RBP13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 CCDC17Q96LX7 622 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 MBOAT7Q96N66 472 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 TSG101Q99816 390 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 NT5C3AQ9H0P0 336 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 PSTPIP2Q9H939 334 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 PCDHA12Q9UN75 941 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 PCDHA2Q9Y5H9 948 aa13.04□□□□□ -0.32
TNFRSF9-201ENST00000377507 USO1O60763 962 aaKnown RBP13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 USP11P51784 963 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 KIF11P52732 1056 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 MARSP56192 900 aaKnown RBP13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 KCNMA1Q12791 1236 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 COASYQ13057 564 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 KRT26Q7Z3Y9 468 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 C2CD5Q86YS7 1000 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 GLIS3Q8NEA6 775 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 KCNMB3Q9NPA1 279 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 KDM3AQ9Y4C1 1321 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 SSU72P8A0A1W2PR75 194 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 RBAK-RBAKDNI3L0D1 243 aa13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 PDE2AO00408 941 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF9-201ENST00000377507 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms