RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	LDHD	Q86WU2	507 aa		13.08	□□□□□ -0.31
LMO7-204	ENST00000377499	FAM177A1	Q8N128	213 aa	Predicted RBP	13.08	□□□□□ -0.31
LMO7-204	ENST00000377499	ZNF280C	Q8ND82	737 aa		13.08	□□□□□ -0.31
LMO7-204	ENST00000377499	TBC1D5	Q92609	795 aa		13.08	□□□□□ -0.31
LMO7-204	ENST00000377499	DONSON	Q9NYP3	566 aa		13.08	□□□□□ -0.31
LMO7-204	ENST00000377499	FER1L6	Q2WGJ9	1857 aa		13.08	□□□□□ -0.31
LMO7-204	ENST00000377499	KIF13B	Q9NQT8	1826 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499		M0R2N6	131 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	ZBED4	O75132	1171 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	CAVIN2	O95810	425 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	USP14	P54578	494 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	KRT79	Q5XKE5	535 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	RBM43	Q6ZSC3	357 aa	Known RBP	13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	PCDHA12	Q9UN75	941 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.08	□□□□□ -0.32
LMO7-204	ENST00000377499		A0A087X0B3	334 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	POTEM	A6NI47	508 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	LAD1	O00515	517 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	SNX29	Q8TEQ0	813 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	PKD2L1	Q9P0L9	805 aa		13.08	□□□□□ -0.32
LMO7-204	ENST00000377499	ARHGAP4	P98171	946 aa		13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	NBPF20	Q3BBV1	942 aa		13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	TTC19	Q6DKK2	380 aa	Predicted RBP	13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	PAGE5	Q96GU1	130 aa		13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	PYM1	Q9BRP8	204 aa	Known RBP	13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	COL2A1	P02458	1487 aa	Predicted RBP	13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	WDR46	O15213	610 aa	Known RBP	13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	VCAM1	P19320	739 aa		13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	STX17	P56962	302 aa		13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	LPAR1	Q92633	364 aa		13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	MAPK8IP1	Q9UQF2	711 aa		13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	EPHX2	P34913	555 aa		13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	SLC24A3	Q9HC58	644 aa		13.07	□□□□□ -0.32
LMO7-204	ENST00000377499	SMTNL1	A8MU46	457 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	FOS	P01100	380 aa	Predicted RBP	13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	PTPRA	P18433	802 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	CCDC47	Q96A33	483 aa	Known RBP	13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	MTMR8	Q96EF0	704 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	KIAA1683	Q9H0B3	1180 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	ZHX3	Q9H4I2	956 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	EHMT1	Q9H9B1	1298 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	DACH1	Q9UI36	760 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	ACTN4	O43707	911 aa	Known RBP	13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	SERPINC1	P01008	464 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	CYP2C19	P33261	490 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	MAP2K2	P36507	400 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	BACE1	P56817	501 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	GADL1	Q6ZQY3	521 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	CCDC91	Q7Z6B0	441 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	DISC1	Q9NRI5	854 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	MAN1B1	Q9UKM7	699 aa		13.06	□□□□□ -0.32
LMO7-204	ENST00000377499	CHMP2A	O43633	222 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	IDE	P14735	1019 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	SSR1	P43307	286 aa	Known RBP	13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	AP3B2	Q13367	1082 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	NCAPH2	Q6IBW4	605 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	BTNL9	Q6UXG8	535 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	TRMT44	Q8IYL2	757 aa	Known RBP	13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	C4orf32	Q8N8J7	132 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	CCDC112	Q8NEF3	446 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	OTUD5	Q96G74	571 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	ELP3	Q9H9T3	547 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	PGAP2	Q9UHJ9	254 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	MYH15	Q9Y2K3	1946 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	MEIS2	O14770	477 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	PLCG1	P19174	1290 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	CCT6A	P40227	531 aa	Known RBP	13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	MOB2	Q70IA6	237 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	ANKRD20A12P	Q8NF67	263 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	NAP1L4	Q99733	375 aa	Known RBP	13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	ZNF446	Q9NWS9	450 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	PYCARD	Q9ULZ3	195 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	KRT18	P05783	430 aa	Known RBP	13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	IREB2	P48200	963 aa	Known RBP	13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	ASIC1	P78348	528 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	ATG4C	Q96DT6	458 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	KLRG1	Q96E93	195 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	TCEAL9	Q9UHQ7	104 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	SYNPO2	Q9UMS6	1093 aa		13.05	□□□□□ -0.32
LMO7-204	ENST00000377499	COBL	O75128	1261 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	MYCL	P12524	364 aa	Predicted RBP	13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	GCFC2	P16383	781 aa	Known RBP	13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	CUL4B	Q13620	913 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	WDR78	Q5VTH9	848 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	EMILIN3	Q9NT22	766 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499		H0YHG0	523 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	PRPH	P41219	470 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	MAP3K9	P80192	1104 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	SARNP	P82979	210 aa	Known RBP	13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	TEX35	Q5T0J7	233 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	FILIP1	Q7Z7B0	1213 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	AK8	Q96MA6	479 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	PRDM16	Q9HAZ2	1276 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	FAM237A	A0A1B0GTK4	181 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	DDX39A	O00148	427 aa	Known RBP	13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	PES1	O00541	588 aa	Known RBP	13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	GRIN3B	O60391	1043 aa		13.04	□□□□□ -0.32
LMO7-204	ENST00000377499	ECM2	O94769	699 aa	Predicted RBP	13.04	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms