RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 ADAMTS1Q9UHI8 967 aa12.93□□□□□ -0.34
DDR1-227ENST00000376570 ACTN1P12814 892 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 TMTC1Q8IUR5 882 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
DDR1-227ENST00000376570 ESYT3A0FGR9 886 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 GAS7O60861 476 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 NR2F2P24468 414 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 EHHADHQ08426 723 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 KCNK18Q7Z418 384 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 ERMNQ8TAM6 284 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 PDE11AQ9HCR9 933 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 ADGRG1Q9Y653 693 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 MRC1P22897 1456 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 KLHL30Q0D2K2 578 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 MKRN3Q13064 507 aaKnown RBP12.92□□□□□ -0.34
DDR1-227ENST00000376570 BARGINQ6ZT62 677 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 MAATS1Q7Z4T9 603 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 CDAN1Q8IWY9 1227 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 BANK1Q8NDB2 785 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 IL17RAQ96F46 866 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 ANO3Q9BYT9 981 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 BCAS3Q9H6U6 928 aa12.92□□□□□ -0.34
DDR1-227ENST00000376570 H7C1D1 291 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 ZEB2O60315 1214 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 GFPT1Q06210 699 aaPredicted RBP12.91□□□□□ -0.34
DDR1-227ENST00000376570 TAB3Q8N5C8 712 aaPredicted RBP12.91□□□□□ -0.34
DDR1-227ENST00000376570 ABHD10Q9NUJ1 306 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 WDR19Q8NEZ3 1342 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 PSDA5PKW4 1024 aaPredicted RBP12.91□□□□□ -0.34
DDR1-227ENST00000376570 CTIFO43310 598 aaKnown RBP12.91□□□□□ -0.34
DDR1-227ENST00000376570 TACC1O75410 805 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 FLOT1O75955 427 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 NDUFA10O95299 355 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 PLA2G4BP0C869 781 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 EZH2Q15910 746 aaKnown RBP12.91□□□□□ -0.34
DDR1-227ENST00000376570 MB21D1Q8N884 522 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 MTRQ99707 1265 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 TRIM9Q9C026 710 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 JMJD4Q9H9V9 463 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 MYO1AQ9UBC5 1043 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 USP20Q9Y2K6 914 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 RSPH10B2B2RC85 870 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 RSPH10BP0C881 870 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 TCHPQ9BT92 498 aa12.91□□□□□ -0.34
DDR1-227ENST00000376570 ADD3Q9UEY8 706 aaKnown RBP12.91□□□□□ -0.34
DDR1-227ENST00000376570 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.91□□□□□ -0.34
DDR1-227ENST00000376570 GOLGA6L9A6NEM1 432 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 H0YHG0 523 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 CETN3O15182 167 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 NKRFO15226 690 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDR1-227ENST00000376570 KCTD16Q68DU8 428 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 GPATCH11Q8N954 259 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 TRIML1Q8N9V2 468 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 SECISBP2LQ93073 1101 aaKnown RBP12.9□□□□□ -0.34
DDR1-227ENST00000376570 FAM84AQ96KN4 292 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 MED15Q96RN5 788 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 NHEJ1Q9H9Q4 299 aaPredicted RBP12.9□□□□□ -0.34
DDR1-227ENST00000376570 TLDC2A0PJX2 215 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 EXOC3O60645 756 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 BMP3P12645 472 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 TM4SF1P30408 202 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 RIN2Q8WYP3 895 aaPredicted RBP12.9□□□□□ -0.34
DDR1-227ENST00000376570 COA1Q9GZY4 146 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 TMEM150BA6NC51 233 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 SND1Q7KZF4 910 aaKnown RBP eCLIP12.9□□□□□ -0.34
DDR1-227ENST00000376570 SFR1Q86XK3 245 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
DDR1-227ENST00000376570 MRRFQ96E11 262 aaKnown RBP12.9□□□□□ -0.34
DDR1-227ENST00000376570 ZNF341Q9BYN7 854 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 RWDD2AQ9UIY3 292 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 MYO6Q9UM54 1294 aa12.9□□□□□ -0.34
DDR1-227ENST00000376570 CEP104O60308 925 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 ERVK-24P63145 666 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 NR1I3Q14994 352 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 ZSCAN26Q16670 478 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 REXO1L1PQ8IX06 675 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 ALS2CR12Q96Q35 445 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 PYM1Q9BRP8 204 aaKnown RBP12.89□□□□□ -0.35
DDR1-227ENST00000376570 AMNQ9BXJ7 453 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 PI4KBQ9UBF8 816 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 DCCP43146 1447 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 C5P01031 1676 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 ARHGEF35A5YM69 484 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 LRRC53A6NM62 1247 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 FGFR1OPO95684 399 aaKnown RBP12.89□□□□□ -0.35
DDR1-227ENST00000376570 NDUFB10O96000 172 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 PSMC6P62333 389 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 KRT83P78385 493 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 KIAA0753Q2KHM9 967 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 ZC2HC1CQ53FD0 456 aaPredicted RBP12.89□□□□□ -0.35
DDR1-227ENST00000376570 PPP1R18Q6NYC8 613 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 GJB7Q6PEY0 223 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 IPO4Q8TEX9 1081 aaKnown RBP12.89□□□□□ -0.35
DDR1-227ENST00000376570 PAGR1Q9BTK6 254 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 NDST4Q9H3R1 872 aa12.89□□□□□ -0.35
DDR1-227ENST00000376570 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms