RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 BBOX1O75936 387 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 GOLGA8HP0CJ92 632 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 LIG3P49916 1009 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 PPFIA1Q13136 1202 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 TADA2BQ86TJ2 420 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 ZSCAN29Q8IWY8 852 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 KIAA0895Q8NCT3 520 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 CRAMP1Q96RY5 1269 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 TSGA10Q9BZW7 698 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 DEF6Q9H4E7 631 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 MAD2L2Q9UI95 211 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 PLAGL2Q9UPG8 496 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 IRS2Q9Y4H2 1338 aa15.67■□□□□ 0.1
CLCNKA-202ENST00000375692 ANKRD31Q8N7Z5 1873 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 MYL1P05976 194 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 TECP42680 631 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 GTF2A1P52655 376 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 CDK17Q00537 523 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 LETM2Q2VYF4 491 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 MS4A14Q96JA4 679 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 SH3GLB2Q9NR46 395 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 TCP11L1Q9NUJ3 509 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 SAMM50Q9Y512 469 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 DLEC1Q9Y238 1755 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 A0A1W2PQJ5 194 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 RGPD3A6NKT7 1758 aaPredicted RBP15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 GRIN2DO15399 1336 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 AKR1B10O60218 316 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 CCNT1O60563 726 aaKnown RBP15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 UFL1O94874 794 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 TTMPQ5BVD1 217 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 HAUS3Q68CZ6 603 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 RRAGAQ7L523 313 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 RGPD4Q7Z3J3 1758 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 FAM114A1Q8IWE2 563 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 FAM169AQ9Y6X4 670 aa15.66■□□□□ 0.1
CLCNKA-202ENST00000375692 A0A087WUV0 522 aaPredicted RBP15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 STXBP3O00186 592 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 BUB1O43683 1085 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 PDE6BP35913 854 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 DNA2P51530 1060 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 FIGNQ5HY92 759 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 CCDC181Q5TID7 509 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 RBM12Q9NTZ6 932 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 SIK3Q9Y2K2 1263 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 LRRC53A6NM62 1247 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 EBAG9O00559 213 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 PPEF1O14829 653 aaPredicted RBP15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 VWA3BQ502W6 1294 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 KCTD16Q68DU8 428 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 SH2D3CQ8N5H7 860 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 CCDC155Q8N6L0 562 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 CCDC47Q96A33 483 aaKnown RBP15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 SH3GL2Q99962 352 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 C7orf25Q9BPX7 421 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 NDST4Q9H3R1 872 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 A0A1B0GUL6 1792 aa15.65■□□□□ 0.1
CLCNKA-202ENST00000375692 EIF3HO15372 352 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 ZBTB7AO95365 584 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 NPR1P16066 1061 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 MAGEA1P43355 309 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 RASSF7Q02833 373 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 GFPT1Q06210 699 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 TMC4Q7Z404 712 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 ATP8A2Q9NTI2 1148 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 STIM2Q9P246 746 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 ZSCAN5CA6NGD5 496 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 C6orf229H3BNL8 230 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 OR52Z1P0C646 297 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 TBC1D16Q8TBP0 767 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 KAT2BQ92831 832 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 MTMR8Q96EF0 704 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 MMTAG2Q9BU76 263 aaKnown RBP15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 BARHL2Q9NY43 387 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 ARPP21Q9UBL0 812 aaPredicted RBP15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 LEMD3Q9Y2U8 911 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 HYOU1Q9Y4L1 999 aa15.64■□□□□ 0.09
CLCNKA-202ENST00000375692 ESYT3A0FGR9 886 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 GOLGA8KD6RF30 607 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 HNRNPH3P31942 346 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 ATP1A2P50993 1020 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 PDCLQ13371 301 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 GRM4Q14833 912 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 DYMQ7RTS9 669 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 ZNF572Q7Z3I7 529 aaPredicted RBP15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 SLC44A5Q8NCS7 719 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 TLR10Q9BXR5 811 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 RIMBP2O15034 1052 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 KRT14P02533 472 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 PRLRP16471 622 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 NAP1L1P55209 391 aaKnown RBP15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 MASTLQ96GX5 879 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 ZIM3Q96PE6 472 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 GGA1Q9UJY5 639 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 STX8Q9UNK0 236 aa15.63■□□□□ 0.09
CLCNKA-202ENST00000375692 OPA1O60313 960 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 ERLIN2O94905 339 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 CPP00450 1065 aa15.62■□□□□ 0.09
CLCNKA-202ENST00000375692 GLI1P08151 1106 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms