RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ARNTL2Q8WYA1 636 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 HLA-CQ95604 372 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 TTC14Q96N46 770 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 TMEM47Q9BQJ4 181 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 NOD1Q9Y239 953 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 TAF6LQ9Y6J9 622 aa14.19□□□□□ -0.14
LSM2-208ENST00000375661 EPOPA6NHQ4 379 aa14.18□□□□□ -0.14
LSM2-208ENST00000375661 TLL1O43897 1013 aa14.18□□□□□ -0.14
LSM2-208ENST00000375661 PCP11498 1178 aaKnown RBP14.18□□□□□ -0.14
LSM2-208ENST00000375661 RPS6P62753 249 aaKnown RBP14.18□□□□□ -0.14
LSM2-208ENST00000375661 C8orf34Q49A92 452 aa14.18□□□□□ -0.14
LSM2-208ENST00000375661 RGS22Q8NE09 1264 aa14.18□□□□□ -0.14
LSM2-208ENST00000375661 CERS4Q9HA82 394 aa14.18□□□□□ -0.14
LSM2-208ENST00000375661 FRMPD2Q68DX3 1309 aaPredicted RBP14.17□□□□□ -0.14
LSM2-208ENST00000375661 MYH7BA7E2Y1 1941 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 SEC24BO95487 1268 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 TXNP10599 105 aaKnown RBP14.17□□□□□ -0.14
LSM2-208ENST00000375661 PDHBP11177 359 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 RBL2Q08999 1139 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 GRB10Q13322 594 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 CREB3L3Q68CJ9 461 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 MFSD6Q6ZSS7 791 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 STOX1Q6ZVD7 989 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 HCN4Q9Y3Q4 1203 aa14.17□□□□□ -0.14
LSM2-208ENST00000375661 NEDD4P46934 1319 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 SLC27A2O14975 620 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 REC8O95072 547 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 SNHG28P0DPA3 235 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 HOXD11P31277 338 aaPredicted RBP14.16□□□□□ -0.14
LSM2-208ENST00000375661 NT5C2P49902 561 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 ZNF543Q08ER8 600 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 PTGISQ16647 500 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 COPS5Q92905 334 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 USP26Q9BXU7 913 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 RNF41Q9H4P4 317 aaPredicted RBP14.16□□□□□ -0.14
LSM2-208ENST00000375661 TOMM22Q9NS69 142 aa14.16□□□□□ -0.14
LSM2-208ENST00000375661 EPB41L2O43491 1005 aaKnown RBP14.15□□□□□ -0.14
LSM2-208ENST00000375661 LPXNO60711 386 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 EFCAB14O75071 495 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 ARHGEF15O94989 841 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 SELPP16109 830 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 WDR5P61964 334 aaKnown RBP14.15□□□□□ -0.14
LSM2-208ENST00000375661 RRP12Q5JTH9 1297 aaKnown RBP14.15□□□□□ -0.14
LSM2-208ENST00000375661 TMEM31Q5JXX7 168 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 GPATCH4Q5T3I0 446 aaKnown RBP14.15□□□□□ -0.14
LSM2-208ENST00000375661 KRT40Q6A162 431 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 CCDC62Q6P9F0 684 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 CNKSR3Q6P9H4 555 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 LRRC8DQ7L1W4 858 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 RASEFQ8IZ41 740 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 KCNB2Q92953 911 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 LRFN3Q9BTN0 628 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 LAMA4Q16363 1823 aa14.15□□□□□ -0.14
LSM2-208ENST00000375661 ABHD14A-ACY1A0A1B0GW23 586 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 E7EWF7 191 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 GPR37L1O60883 481 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 ARIH2O95376 493 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 GH1P01241 217 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 CXCL10P02778 98 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 MMP3P08254 477 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 CASTP20810 708 aaKnown RBP14.14□□□□□ -0.15
LSM2-208ENST00000375661 HSPA4P34932 840 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 CTAGE1Q96RT6 745 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 IWS1Q96ST2 819 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 ZBED2Q9BTP6 218 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 KATNAL1Q9BW62 490 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 EPHX3Q9H6B9 360 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 XIRP2A4UGR9 3374 aa14.14□□□□□ -0.15
LSM2-208ENST00000375661 B4E1Z4 1266 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 GJB5O95377 273 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 ARHGAP1Q07960 439 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 COL9A3Q14050 684 aaPredicted RBP14.13□□□□□ -0.15
LSM2-208ENST00000375661 TSGA10IPQ3SY00 556 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 GDF6Q6KF10 455 aaPredicted RBP14.13□□□□□ -0.15
LSM2-208ENST00000375661 NSUN6Q8TEA1 469 aaKnown RBP14.13□□□□□ -0.15
LSM2-208ENST00000375661 AFG1LQ8WV93 481 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 ESR2Q92731 530 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 EMID1Q96A84 441 aaPredicted RBP14.13□□□□□ -0.15
LSM2-208ENST00000375661 RAD9AQ99638 391 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 GTF2IRD1Q9UHL9 959 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 MICAL3Q7RTP6 2002 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 ABCB11O95342 1321 aa14.13□□□□□ -0.15
LSM2-208ENST00000375661 KDM4AO75164 1064 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 ERVK-21P61565 698 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 GPNMBQ14956 572 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 STXBP2Q15833 593 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 DGKDQ16760 1214 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 CCDC178Q5BJE1 867 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 RNF20Q5VTR2 975 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 DGKHQ86XP1 1220 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 MCF2L2Q86YR7 1114 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 PPP1R13LQ8WUF5 828 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 KAT2BQ92831 832 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 TGS1Q96RS0 853 aaKnown RBP14.12□□□□□ -0.15
LSM2-208ENST00000375661 KRT23Q9C075 422 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 CNNM2Q9H8M5 875 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 ZSWIM5Q9P217 1185 aa14.12□□□□□ -0.15
LSM2-208ENST00000375661 LCHNA4D1U4 455 aa14.11□□□□□ -0.15
LSM2-208ENST00000375661 PI4K2BG5E9Z4 385 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms