RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CTAGE4Q8IX94 777 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 MSL3Q8N5Y2 521 aaKnown RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 PKNOX2Q96KN3 472 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 GLT8D2Q9H1C3 349 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 TAF1DQ9H5J8 278 aaPredicted RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 ZNF277Q9NRM2 450 aaPredicted RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 LRWD1Q9UFC0 647 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 FOCADQ5VW36 1801 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 B4DLN1 442 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 PSMD14O00487 310 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 PPIP5K2O43314 1243 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 TBC1D8O95759 1140 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 GCFC2P16383 781 aaKnown RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 TBC1D8BQ0IIM8 1120 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 SEPT2Q15019 361 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 AOC3Q16853 763 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 CERS5Q8N5B7 392 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 MMTAG2Q9BU76 263 aaKnown RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 UBXN6Q9BZV1 441 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 TTYH3Q9C0H2 523 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 RIC8AQ9NPQ8 531 aa15.54■□□□□ 0.08
HMGCL-203ENST00000374490 BIN2Q9UBW5 565 aaPredicted RBP15.54■□□□□ 0.08
HMGCL-203ENST00000374490 MYH1P12882 1939 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 PNMA6FA0A0J9YX94 578 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 EIF3CLB5ME19 914 aaKnown RBP15.53■□□□□ 0.08
HMGCL-203ENST00000374490 KRT86O43790 486 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 TTLL1O95922 423 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 TRIM21P19474 475 aaKnown RBP15.53■□□□□ 0.08
HMGCL-203ENST00000374490 FKBP1AP62942 108 aaKnown RBP15.53■□□□□ 0.08
HMGCL-203ENST00000374490 LRRC63Q05C16 580 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 GPS2Q13227 327 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 GRB10Q13322 594 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 EAPPQ56P03 285 aaPredicted RBP15.53■□□□□ 0.08
HMGCL-203ENST00000374490 GPATCH4Q5T3I0 446 aaKnown RBP15.53■□□□□ 0.08
HMGCL-203ENST00000374490 STRIP1Q5VSL9 837 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 ANKRD40Q6AI12 368 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 PPP4R3AQ6IN85 833 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 CENPPQ6IPU0 288 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 GUF1Q8N442 669 aaKnown RBP15.53■□□□□ 0.08
HMGCL-203ENST00000374490 LRRC15Q8TF66 581 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 TEKT1Q969V4 418 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 EIF3CQ99613 913 aaKnown RBP15.53■□□□□ 0.08
HMGCL-203ENST00000374490 NOC4LQ9BVI4 516 aaKnown RBP15.53■□□□□ 0.08
HMGCL-203ENST00000374490 TSGA10Q9BZW7 698 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 VAT1LQ9HCJ6 419 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 HACL1Q9UJ83 578 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 MYO6Q9UM54 1294 aa15.53■□□□□ 0.08
HMGCL-203ENST00000374490 TXKP42681 527 aa15.52■□□□□ 0.08
HMGCL-203ENST00000374490 AMPD2Q01433 879 aa15.52■□□□□ 0.08
HMGCL-203ENST00000374490 CKAP4Q07065 602 aaKnown RBP15.52■□□□□ 0.08
HMGCL-203ENST00000374490 ZNF543Q08ER8 600 aa15.52■□□□□ 0.08
HMGCL-203ENST00000374490 STK4Q13043 487 aa15.52■□□□□ 0.08
HMGCL-203ENST00000374490 LARP4BQ92615 738 aaKnown RBP15.52■□□□□ 0.08
HMGCL-203ENST00000374490 RPGRIP1Q96KN7 1286 aa15.52■□□□□ 0.08
HMGCL-203ENST00000374490 CHP1Q99653 195 aa15.52■□□□□ 0.08
HMGCL-203ENST00000374490 CPVLQ9H3G5 476 aa15.52■□□□□ 0.08
HMGCL-203ENST00000374490 PUF60Q9UHX1 559 aaKnown RBP15.52■□□□□ 0.08
HMGCL-203ENST00000374490 REXO2Q9Y3B8 237 aaKnown RBP15.52■□□□□ 0.08
HMGCL-203ENST00000374490 ZNF541Q9H0D2 1346 aa15.52■□□□□ 0.07
HMGCL-203ENST00000374490 SCN9AQ15858 1988 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 BAZ2BQ9UIF8 2168 aaKnown RBP15.51■□□□□ 0.07
HMGCL-203ENST00000374490 A0A0U1RQJ8 604 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 SEC31AO94979 1220 aaKnown RBP15.51■□□□□ 0.07
HMGCL-203ENST00000374490 MCM3P25205 808 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 MRPL12P52815 198 aaKnown RBP15.51■□□□□ 0.07
HMGCL-203ENST00000374490 LONRF2Q1L5Z9 754 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 TMEM119Q4V9L6 283 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 TAF3Q5VWG9 929 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 HHIPL2Q6UWX4 724 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 KIAA1328Q86T90 577 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 ATRIPQ8WXE1 791 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 RAD54LQ92698 747 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 PCMTD1Q96MG8 357 aaPredicted RBP15.51■□□□□ 0.07
HMGCL-203ENST00000374490 TSG101Q99816 390 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 MXD3Q9BW11 206 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 UBA5Q9GZZ9 404 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 TMEM260Q9NX78 707 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 FER1L6Q2WGJ9 1857 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 FRMPD2Q68DX3 1309 aaPredicted RBP15.51■□□□□ 0.07
HMGCL-203ENST00000374490 KDM3AQ9Y4C1 1321 aa15.51■□□□□ 0.07
HMGCL-203ENST00000374490 ZNF646O15015 1829 aaPredicted RBP15.51■□□□□ 0.07
HMGCL-203ENST00000374490 ADAMTSL1Q8N6G6 1762 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 ANO9A1A5B4 782 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 HLA-DOAP06340 250 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 AKR1B1P15121 316 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 HNRNPH3P31942 346 aaKnown RBP15.5■□□□□ 0.07
HMGCL-203ENST00000374490 SCNN1DP51172 638 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 CCDC122Q5T0U0 273 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 WDR59Q6PJI9 974 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 PNMA8AQ86V59 439 aaPredicted RBP15.5■□□□□ 0.07
HMGCL-203ENST00000374490 TXLNBQ8N3L3 684 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 JDP2Q8WYK2 163 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 CUL5Q93034 780 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 JAKMIP2Q96AA8 810 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 CCDC17Q96LX7 622 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 PNMA5Q96PV4 448 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 PSMD1Q99460 953 aa15.5■□□□□ 0.07
HMGCL-203ENST00000374490 FUT8Q9BYC5 575 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms