RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 MICALL2Q8IY33 904 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 TC2NQ8N9U0 490 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 CCDC112Q8NEF3 446 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 STAMQ92783 540 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 CALML4Q96GE6 196 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 TCP11X2Q5H9J9 407 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 NELFBQ8WX92 580 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 CLEC4DQ8WXI8 215 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 NT5C3AQ9H0P0 336 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 CTNND2Q9UQB3 1225 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 SPATA31C1P0DKV0 1188 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 SPAG1Q07617 926 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 R3HDM1Q15032 1099 aaKnown RBP14.1□□□□□ -0.15
PRPF4-202ENST00000374199 E4F1Q66K89 784 aaPredicted RBP14.1□□□□□ -0.15
PRPF4-202ENST00000374199 TMC6Q7Z403 805 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 C17orf53Q8N3J3 647 aaPredicted RBP14.1□□□□□ -0.15
PRPF4-202ENST00000374199 SLC5A5Q92911 643 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 LRRC27Q9C0I9 530 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 EEF1GP26641 437 aaKnown RBP14.1□□□□□ -0.15
PRPF4-202ENST00000374199 SLC12A3P55017 1021 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 PPP2R5CQ13362 524 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 ZCWPW2Q504Y3 356 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 NIPA1Q7RTP0 329 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 PRIMPOLQ96LW4 560 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 POLR3CQ9BUI4 534 aaPredicted RBP14.1□□□□□ -0.15
PRPF4-202ENST00000374199 HACL1Q9UJ83 578 aa14.1□□□□□ -0.15
PRPF4-202ENST00000374199 SKILP12757 684 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 CCAR2Q8N163 923 aaKnown RBP14.09□□□□□ -0.15
PRPF4-202ENST00000374199 REPS2Q8NFH8 660 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 NLGN2Q8NFZ4 835 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 PANX2Q96RD6 677 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 VEZTQ9HBM0 779 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 SLC38A10Q9HBR0 1119 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 RABGAP1Q9Y3P9 1069 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 ASTN2O75129 1339 aaPredicted RBP14.09□□□□□ -0.15
PRPF4-202ENST00000374199 SERPINC1P01008 464 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 BCRP11274 1271 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 KRT31Q15323 416 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 DRC7Q8IY82 874 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 GPC2Q8N158 579 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.09□□□□□ -0.15
PRPF4-202ENST00000374199 CNOT7Q9UIV1 285 aaKnown RBP14.09□□□□□ -0.15
PRPF4-202ENST00000374199 PCDHA12Q9UN75 941 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 A0A1W2PQC6 194 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 MSH4O15457 936 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 PSMD10O75832 226 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 CCNE1P24864 410 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 RPA1P27694 616 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 STK4Q13043 487 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 SV2BQ7L1I2 683 aa14.09□□□□□ -0.15
PRPF4-202ENST00000374199 KIF4BQ2VIQ3 1234 aa14.08□□□□□ -0.16
PRPF4-202ENST00000374199 KRT79Q5XKE5 535 aa14.08□□□□□ -0.16
PRPF4-202ENST00000374199 APOBEC3FQ8IUX4 373 aaKnown RBP14.08□□□□□ -0.16
PRPF4-202ENST00000374199 GUF1Q8N442 669 aaKnown RBP14.08□□□□□ -0.16
PRPF4-202ENST00000374199 GPRC5DQ9NZD1 345 aa14.08□□□□□ -0.16
PRPF4-202ENST00000374199 PNMA2Q9UL42 364 aa14.08□□□□□ -0.16
PRPF4-202ENST00000374199 MRPL11Q9Y3B7 192 aaKnown RBP14.08□□□□□ -0.16
PRPF4-202ENST00000374199 ARID2Q68CP9 1835 aa14.08□□□□□ -0.16
PRPF4-202ENST00000374199 FDX1P10109 184 aa14.08□□□□□ -0.16
PRPF4-202ENST00000374199 INPP5BP32019 993 aa14.08□□□□□ -0.16
PRPF4-202ENST00000374199 MIGA2Q7L4E1 593 aa14.08□□□□□ -0.16
PRPF4-202ENST00000374199 EMILIN3Q9NT22 766 aa14.08□□□□□ -0.16
PRPF4-202ENST00000374199 ATP2A1O14983 1001 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 SNAP25P60880 206 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 SPICE1Q8N0Z3 855 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 SNX29Q8TEQ0 813 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 MEIS1O00470 390 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 MCM6Q14566 821 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 ARSHQ5FYA8 562 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 P2RX5Q93086 422 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 HSD17B14Q9BPX1 270 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 TTYH3Q9C0H2 523 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 SEMA6BQ9H3T3 888 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 TEX33O43247 280 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 STX10O60499 249 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 MED24O75448 989 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 SFPQP23246 707 aaKnown RBP eCLIP14.07□□□□□ -0.16
PRPF4-202ENST00000374199 MARSP56192 900 aaKnown RBP14.07□□□□□ -0.16
PRPF4-202ENST00000374199 FILIP1Q7Z7B0 1213 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 SCYL3Q8IZE3 742 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 HOOK2Q96ED9 719 aa14.07□□□□□ -0.16
PRPF4-202ENST00000374199 USP27XA6NNY8 438 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 KCNJ18B7U540 433 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 TUBB4AP04350 444 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 COPB1P53618 953 aaKnown RBP14.06□□□□□ -0.16
PRPF4-202ENST00000374199 KCNJ12Q14500 433 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
PRPF4-202ENST00000374199 OTOP1Q7RTM1 612 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 LDHDQ86WU2 507 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 PRPF38AQ8NAV1 312 aaKnown RBP14.06□□□□□ -0.16
PRPF4-202ENST00000374199 SLF1Q9BQI6 1058 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 BICDL2A1A5D9 508 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 SPDYE3A6NKU9 549 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 LGALS16A8MUM7 142 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 OAZ1P54368 228 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 MIIPQ5JXC2 388 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 SAMD7Q7Z3H4 446 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 CATSPER3Q86XQ3 398 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 TMEM174Q8WUU8 243 aa14.06□□□□□ -0.16
PRPF4-202ENST00000374199 CCDC51Q96ER9 411 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms