RNA–Protein interactions for RNA: ENST00000373559.8

HDAC8-203, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-203ENST00000373559 PURAQ00577 322 aaKnown RBP18.39■□□□□ 0.53
HDAC8-203ENST00000373559 FAAP100Q0VG06 881 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 SEPT14Q6ZU15 432 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 SH3RF1Q7Z6J0 888 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 FCHSD1Q86WN1 690 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 FAM126BQ8IXS8 530 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 CCDC82Q8N4S0 544 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 ZNF713Q8N859 430 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-203ENST00000373559 CUL5Q93034 780 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 EMID1Q96A84 441 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-203ENST00000373559 TM6SF1Q9BZW5 370 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 ZSWIM6Q9HCJ5 1215 aa18.39■□□□□ 0.53
HDAC8-203ENST00000373559 FAM217BQ9NTX9 383 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-203ENST00000373559 CCDC196A0A1B0GTZ2 297 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 TRIM43BA6NCK2 446 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 KPNA6O60684 536 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 STAM2O75886 525 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 RGS20O76081 388 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 GH1P01241 217 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 CDC27P30260 824 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 METAP2P50579 478 aaKnown RBP eCLIP18.38■□□□□ 0.53
HDAC8-203ENST00000373559 EVCP57679 992 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 MDM2Q00987 491 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-203ENST00000373559 ARHGAP1Q07960 439 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 APOBRQ0VD83 1088 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 PPP1R18Q6NYC8 613 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 KCNV1Q6PIU1 500 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 SMARCC2Q8TAQ2 1214 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 COPS5Q92905 334 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 VTI1AQ96AJ9 217 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 TRIM43Q96BQ3 446 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-203ENST00000373559 UBE2OQ9C0C9 1292 aaKnown RBP18.38■□□□□ 0.53
HDAC8-203ENST00000373559 DDX41Q9UJV9 622 aaKnown RBP18.38■□□□□ 0.53
HDAC8-203ENST00000373559 TBX21Q9UL17 535 aa18.38■□□□□ 0.53
HDAC8-203ENST00000373559 hCG_1642624A0A1W2PR95 340 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 SLC34A2O95436 690 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 CD4P01730 458 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 MYCLP12524 364 aaPredicted RBP18.37■□□□□ 0.53
HDAC8-203ENST00000373559 ITGA7Q13683 1181 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 LY6KQ17RY6 165 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 HEATR3Q7Z4Q2 680 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 TDHQ8IZJ6 230 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 PSTPIP2Q9H939 334 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 MRVI1Q9Y6F6 885 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 GRIN2DO15399 1336 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 TANC1Q9C0D5 1861 aa18.37■□□□□ 0.53
HDAC8-203ENST00000373559 TLR3O15455 904 aaKnown RBP18.36■□□□□ 0.53
HDAC8-203ENST00000373559 TGFB3P10600 412 aa18.36■□□□□ 0.53
HDAC8-203ENST00000373559 WWC2Q6AWC2 1192 aa18.36■□□□□ 0.53
HDAC8-203ENST00000373559 XRRA1Q6P2D8 792 aa18.36■□□□□ 0.53
HDAC8-203ENST00000373559 USP17L6PQ6QN14 398 aa18.36■□□□□ 0.53
HDAC8-203ENST00000373559 GPKOWQ92917 476 aaPredicted RBP eCLIP18.36■□□□□ 0.53
HDAC8-203ENST00000373559 INPP4AQ96PE3 977 aaPredicted RBP18.36■□□□□ 0.53
HDAC8-203ENST00000373559 MTG1Q9BT17 334 aaPredicted RBP18.36■□□□□ 0.53
HDAC8-203ENST00000373559 TMEM39AQ9NV64 488 aa18.36■□□□□ 0.53
HDAC8-203ENST00000373559 PCDH10Q9P2E7 1040 aa18.36■□□□□ 0.53
HDAC8-203ENST00000373559 CYP46A1Q9Y6A2 500 aa18.36■□□□□ 0.53
HDAC8-203ENST00000373559 EIF5BO60841 1220 aaKnown RBP18.35■□□□□ 0.53
HDAC8-203ENST00000373559 MMP3P08254 477 aa18.35■□□□□ 0.53
HDAC8-203ENST00000373559 MYL3P08590 195 aa18.35■□□□□ 0.53
HDAC8-203ENST00000373559 MRPS9P82933 396 aaKnown RBP18.35■□□□□ 0.53
HDAC8-203ENST00000373559 GNPTABQ3T906 1256 aa18.35■□□□□ 0.53
HDAC8-203ENST00000373559 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
HDAC8-203ENST00000373559 BADQ92934 168 aa18.35■□□□□ 0.53
HDAC8-203ENST00000373559 NAP1L2Q9ULW6 460 aaPredicted RBP18.35■□□□□ 0.53
HDAC8-203ENST00000373559 HOXD8P13378 290 aaPredicted RBP18.34■□□□□ 0.53
HDAC8-203ENST00000373559 RAG1P15918 1043 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 ITGB8P26012 769 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 ICAM3P32942 547 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 ADD1P35611 737 aaKnown RBP18.34■□□□□ 0.53
HDAC8-203ENST00000373559 ANAPC15P60006 121 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 PSMC6P62333 389 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 LAMC2Q13753 1193 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 TOB2Q14106 344 aaPredicted RBP18.34■□□□□ 0.53
HDAC8-203ENST00000373559 PPTC7Q8NI37 304 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 AFG1LQ8WV93 481 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 V9GY48 417 aaPredicted RBP18.34■□□□□ 0.53
HDAC8-203ENST00000373559 LAMA3Q16787 3333 aa18.34■□□□□ 0.53
HDAC8-203ENST00000373559 STXBP3O00186 592 aa18.33■□□□□ 0.52
HDAC8-203ENST00000373559 TIMP1P01033 207 aa18.33■□□□□ 0.52
HDAC8-203ENST00000373559 UBA1P22314 1058 aaKnown RBP18.33■□□□□ 0.52
HDAC8-203ENST00000373559 NAPAP54920 295 aa18.33■□□□□ 0.52
HDAC8-203ENST00000373559 PFKFB3Q16875 520 aaPredicted RBP18.33■□□□□ 0.52
HDAC8-203ENST00000373559 LRIT3Q3SXY7 679 aa18.33■□□□□ 0.52
HDAC8-203ENST00000373559 TYW1BQ6NUM6 668 aa18.33■□□□□ 0.52
HDAC8-203ENST00000373559 NFRKBQ6P4R8 1299 aa18.33■□□□□ 0.52
HDAC8-203ENST00000373559 DHX37Q8IY37 1157 aaKnown RBP18.33■□□□□ 0.52
HDAC8-203ENST00000373559 IL17RAQ96F46 866 aa18.33■□□□□ 0.52
HDAC8-203ENST00000373559 RIC8AQ9NPQ8 531 aa18.33■□□□□ 0.52
HDAC8-203ENST00000373559 FIBPO43427 364 aa18.32■□□□□ 0.52
HDAC8-203ENST00000373559 B4GALT4O60513 344 aa18.32■□□□□ 0.52
HDAC8-203ENST00000373559 PDIA3P30101 505 aaKnown RBP18.32■□□□□ 0.52
HDAC8-203ENST00000373559 PTPN11Q06124 597 aaPredicted RBP18.32■□□□□ 0.52
HDAC8-203ENST00000373559 DGKDQ16760 1214 aa18.32■□□□□ 0.52
HDAC8-203ENST00000373559 UBE2SQ16763 222 aa18.32■□□□□ 0.52
HDAC8-203ENST00000373559 CELF3Q5SZQ8 465 aaKnown RBP18.32■□□□□ 0.52
HDAC8-203ENST00000373559 MYSM1Q5VVJ2 828 aa18.32■□□□□ 0.52
HDAC8-203ENST00000373559 UPF3BQ9BZI7 483 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms