RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 THSD7AQ9UPZ6 1657 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 VGLL3A8MV65 326 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 BTNL10A8MVZ5 291 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 RPS8P62241 208 aaKnown RBP8.3□□□□□ -1.08
GARNL3-202ENST00000373387 NONOQ15233 471 aaKnown RBP eCLIP8.3□□□□□ -1.08
GARNL3-202ENST00000373387 ALS2CLQ60I27 953 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 ANKRD2Q9GZV1 360 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 ZNHIT6Q9NWK9 470 aaKnown RBP8.3□□□□□ -1.08
GARNL3-202ENST00000373387 EHD2Q9NZN4 543 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 UBR3Q6ZT12 1888 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 NRXN2Q9P2S2 1712 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 SNHG28P0DPA3 235 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 ECHS1P30084 290 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 PDIA5Q14554 519 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 TSR1Q2NL82 804 aaKnown RBP8.3□□□□□ -1.08
GARNL3-202ENST00000373387 KCNK18Q7Z418 384 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 HEATR3Q7Z4Q2 680 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 SLC51AQ86UW1 340 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 EEF2KMTQ96G04 330 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 CCDC42Q96M95 316 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 INPP4AQ96PE3 977 aaPredicted RBP8.3□□□□□ -1.08
GARNL3-202ENST00000373387 EHD4Q9H223 541 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 RBM12Q9NTZ6 932 aaKnown RBP8.3□□□□□ -1.08
GARNL3-202ENST00000373387 TFCP2L1Q9NZI6 479 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 SLC37A4O43826 429 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 TACC1O75410 805 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 ECM1Q16610 540 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 C2CD5Q86YS7 1000 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 SUGP1Q8IWZ8 645 aaKnown RBP8.3□□□□□ -1.08
GARNL3-202ENST00000373387 PROM2Q8N271 834 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 SLC44A5Q8NCS7 719 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 GLIS3Q8NEA6 775 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 NEDD1Q8NHV4 660 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 FAM76AQ8TAV0 307 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 RAD54LQ92698 747 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 GDAP1L1Q96MZ0 367 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 PLEKHA4Q9H4M7 779 aa8.3□□□□□ -1.08
GARNL3-202ENST00000373387 IGKV6D-41A0A0C4DH26 115 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 GOLGA6CA6NDK9 693 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 KLRF2D3W0D1 207 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 hCG_1984214I3L0E3 225 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 CES2O00748 559 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 CCNT1O60563 726 aaKnown RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 GOLGA6DP0CG33 693 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 TECP42680 631 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 TNNT3P45378 269 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 MTIF2P46199 727 aaKnown RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 ASIC1P78348 528 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 PSMD2Q13200 908 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 CCDC84Q86UT8 332 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 ZNF713Q8N859 430 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 OLIG1Q8TAK6 271 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 KAT2BQ92831 832 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 ARL8AQ96BM9 186 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 NUDT12Q9BQG2 462 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 SLC39A2Q9NP94 309 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 JADE2Q9NQC1 790 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 GOLGA6AQ9NYA3 693 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 SMARCAL1Q9NZC9 954 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 RNF14Q9UBS8 474 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 GLI1P08151 1106 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 AMPD3Q01432 767 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 DNAJC21Q5F1R6 531 aaKnown RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 MEI1Q5TIA1 1274 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 EIF1ADQ8N9N8 165 aaKnown RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 TBCKQ8TEA7 893 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 PPM1EQ8WY54 764 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 ZIM3Q96PE6 472 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 SPATA31A5Q5VU36 1347 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 SPATA31A7Q8IWB4 1347 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 FRMD3A2A2Y4 597 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 GRID2IPA4D2P6 1211 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 SMCO2A6NFE2 343 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 ZNF233A6NK53 670 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 NCK2O43639 380 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 USO1O60763 962 aaKnown RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 SLC1A4P43007 532 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 GFPT1Q06210 699 aaPredicted RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 NAB2Q15742 525 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 FKBP15Q5T1M5 1219 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 BARGINQ6ZT62 677 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 SND1Q7KZF4 910 aaKnown RBP eCLIP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 TADA2BQ86TJ2 420 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 LARP4BQ92615 738 aaKnown RBP8.29□□□□□ -1.08
GARNL3-202ENST00000373387 CEP72Q9P209 647 aa8.29□□□□□ -1.08
GARNL3-202ENST00000373387 A0A087WUV0 522 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-202ENST00000373387 SRRM3A6NNA2 597 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-202ENST00000373387 SPA17Q15506 151 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 CCDC96Q2M329 555 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 LETM2Q2VYF4 491 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 SPTY2D1Q68D10 685 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-202ENST00000373387 KDM7AQ6ZMT4 941 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 GOLGA6L1Q8N7Z2 621 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 SMARCC1Q92922 1105 aaPredicted RBP8.28□□□□□ -1.08
GARNL3-202ENST00000373387 CRACR2AQ9BSW2 395 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 GANQ9H2C0 597 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 KCTD10Q9H3F6 313 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 CPVLQ9H3G5 476 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 RIC8AQ9NPQ8 531 aa8.28□□□□□ -1.08
GARNL3-202ENST00000373387 GOLGA8HP0CJ92 632 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms