RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 DMTNQ08495 405 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 PTGDRQ13258 359 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 EZH2Q15910 746 aaKnown RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 OTUD7BQ6GQQ9 843 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 DDX25Q9UHL0 483 aaKnown RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 MINPP1Q9UNW1 487 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 PVALEFA0A1B0GWK0 134 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 ONECUT3O60422 494 aaPredicted RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 FKBP3Q00688 224 aaKnown RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 ARID5AQ03989 594 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 DDR1Q08345 913 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 TRPC3Q13507 836 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 BRDTQ58F21 947 aaPredicted RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 ADGRA1Q86SQ6 560 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 LARP4BQ92615 738 aaKnown RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 NCAPGQ9BPX3 1015 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 TCHPQ9BT92 498 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 ZNF215Q9UL58 517 aaPredicted RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 HMGB1P1B2RPK0 211 aaPredicted RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 BTBD18B2RXH4 712 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 FOXP2O15409 715 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 BUB1BO60566 1050 aaPredicted RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 SARNPP82979 210 aaKnown RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 PPP2R5AQ15172 486 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 SND1Q7KZF4 910 aaKnown RBP eCLIP11.62□□□□□ -0.554e-10■■□□□ 11.8
PGK1-201ENST00000373316 C2CD5Q86YS7 1000 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 TUBGCP2Q9BSJ2 902 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 VCX3BQ9H321 246 aa11.62□□□□□ -0.55
PGK1-201ENST00000373316 MYO5AQ9Y4I1 1855 aaKnown RBP11.62□□□□□ -0.55
PGK1-201ENST00000373316 GOLGA8QA0A0J9YX86 632 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 GOLGA8OA6NCC3 632 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 GOLGA8NF8WBI6 632 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 SART1O43290 800 aaKnown RBP11.61□□□□□ -0.55
PGK1-201ENST00000373316 DCAF15Q66K64 600 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 RCSD1Q6JBY9 416 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 EMBQ6PCB8 327 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 COL23A1Q86Y22 540 aaPredicted RBP11.61□□□□□ -0.55
PGK1-201ENST00000373316 TRIM42Q8IWZ5 723 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 MORC4Q8TE76 937 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 CABS1Q96KC9 395 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 AMNQ9BXJ7 453 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 FAM204AQ9H8W3 233 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 FAM169AQ9Y6X4 670 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 CNTNAP4Q9C0A0 1308 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 CCDC188H7C350 402 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 GCNT3O95395 438 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 ADD1P35611 737 aaKnown RBP11.61□□□□□ -0.55
PGK1-201ENST00000373316 CUL1Q13616 776 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 FBXO11Q86XK2 927 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 STMN2Q93045 179 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 STK32BQ9NY57 414 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 PASKQ96RG2 1323 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 PRR5LQ6MZQ0 368 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 NEK9Q8TD19 979 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 ZEB2O60315 1214 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 GAS7O60861 476 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 TTLL1O95922 423 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 POLR2BP30876 1174 aaKnown RBP11.61□□□□□ -0.55
PGK1-201ENST00000373316 PLCB3Q01970 1234 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 ZSCAN26Q16670 478 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 PPP1R21Q6ZMI0 780 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 CDHR1Q96JP9 859 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 CNOT6LQ96LI5 555 aaKnown RBP11.61□□□□□ -0.55
PGK1-201ENST00000373316 SUGT1Q9Y2Z0 365 aa11.61□□□□□ -0.55
PGK1-201ENST00000373316 PRPF6O94906 941 aaKnown RBP11.6□□□□□ -0.55
PGK1-201ENST00000373316 SERPING1P05155 500 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 SURF1Q15526 300 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 TGFBRAP1Q8WUH2 860 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 SAP30BPQ9UHR5 308 aaKnown RBP11.6□□□□□ -0.55
PGK1-201ENST00000373316 CYP2D7A0A087X1C5 515 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 A0A1W2PQC6 194 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 RIMBP2O15034 1052 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 SERPINB2P05120 415 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 TOB2Q14106 344 aaPredicted RBP11.6□□□□□ -0.55
PGK1-201ENST00000373316 HADHQ16836 314 aaKnown RBP11.6□□□□□ -0.55
PGK1-201ENST00000373316 CFAP157Q5JU67 520 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 MIER3Q7Z3K6 550 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 SDR42E1Q8WUS8 393 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 CAPS2Q9BXY5 557 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 ACTR5Q9H9F9 607 aaPredicted RBP11.6□□□□□ -0.55
PGK1-201ENST00000373316 AGTPBP1Q9UPW5 1226 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 GRID2IPA4D2P6 1211 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 BACH1O14867 736 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 ADRA2BP18089 450 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 MFAP3P55082 362 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 MXRA7P84157 204 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 LONRF2Q1L5Z9 754 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 PHLDB2Q86SQ0 1253 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 EFCAB13Q8IY85 973 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 NLGN1Q8N2Q7 840 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 KCNB2Q92953 911 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 MAP3K14Q99558 947 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 KCNK9Q9NPC2 374 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
PGK1-201ENST00000373316 KRT5P13647 590 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 PSMC2P35998 433 aaKnown RBP11.6□□□□□ -0.55
PGK1-201ENST00000373316 BIRC3Q13489 604 aa11.6□□□□□ -0.55
PGK1-201ENST00000373316 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms