RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 KDM4AO75164 1064 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 EIF3JO75822 258 aaKnown RBP15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 CXCL10P02778 98 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 KCNJ6P48051 423 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 KCNQ1P51787 676 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 DGKDQ16760 1214 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 ASPRV1Q53RT3 343 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 EMID1Q96A84 441 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 NECAB3Q96P71 396 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 KAT14Q9H8E8 782 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 GTF2IRD1Q9UHL9 959 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 DDX41Q9UJV9 622 aaKnown RBP15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 MRPL11Q9Y3B7 192 aaKnown RBP15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 TET1Q8NFU7 2136 aa15.29■□□□□ 0.04
TRAPPC3-201ENST00000373159 WDR5P61964 334 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 GRB10Q13322 594 aa15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 QRICH1Q2TAL8 776 aa15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 LRRC8DQ7L1W4 858 aa15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 CHST3Q7LGC8 479 aa15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 DHX38Q92620 1227 aaKnown RBP15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 ZSCAN10Q96SZ4 725 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 C1QTNF1Q9BXJ1 281 aa15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 LNPKQ9C0E8 428 aa15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 OSBPL3Q9H4L5 887 aa15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 LMCD1Q9NZU5 365 aa15.28■□□□□ 0.04
TRAPPC3-201ENST00000373159 SCN5AQ14524 2016 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 LPXNO60711 386 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 NR3C2P08235 984 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 AAMPQ13685 434 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 LAMC2Q13753 1193 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 ARHGEF16Q5VV41 709 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 KRT40Q6A162 431 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 CNKSR3Q6P9H4 555 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 FBXO11Q86XK2 927 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 SMC5Q8IY18 1101 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 C7orf31Q8N865 590 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 ENAHQ8N8S7 591 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 HLA-CQ95604 372 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 JMJD4Q9H9V9 463 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 ZSWIM5Q9P217 1185 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 HDAC6Q9UBN7 1215 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 RAPGEFL1Q9UHV5 662 aa15.27■□□□□ 0.04
TRAPPC3-201ENST00000373159 REV3LO60673 3130 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 ABHD14A-ACY1A0A1B0GW23 586 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 HAS3O00219 553 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 NBNO60934 754 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 PARP1P09874 1014 aaKnown RBP15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 CKBP12277 381 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 PSEN2P49810 448 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 GHRHRQ02643 423 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 PTK7Q13308 1070 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 PLEKHM2Q8IWE5 1019 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 PPTC7Q8NI37 304 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 RAD9AQ99638 391 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 ZBED2Q9BTP6 218 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 KATNAL1Q9BW62 490 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 VAT1LQ9HCJ6 419 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 PXMP2Q9NR77 195 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 MAP3K20Q9NYL2 800 aaKnown RBP15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 BRWD1Q9NSI6 2320 aa15.26■□□□□ 0.03
TRAPPC3-201ENST00000373159 LCHNA4D1U4 455 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 B4E1Z4 1266 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 DHX16O60231 1041 aaKnown RBP15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 EFCAB14O75071 495 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 PPFIA4O75335 1185 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 GJB5O95377 273 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 F2P00734 622 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 HOXD8P13378 290 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 EIF2AK2P19525 551 aaKnown RBP15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 HSD17B4P51659 736 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 MFSD10Q14728 455 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 CWC27Q6UX04 472 aaKnown RBP15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 SPRED2Q7Z698 418 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 DHX37Q8IY37 1157 aaKnown RBP15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 SAMD3Q8N6K7 520 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 DSCC1Q9BVC3 393 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 AMNQ9BXJ7 453 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 MRVI1Q9Y6F6 885 aa15.25■□□□□ 0.03
TRAPPC3-201ENST00000373159 TRIP12Q14669 1992 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 TCF20Q9UGU0 1960 aaKnown RBP15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 HIP1O00291 1037 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 OPLAHO14841 1288 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 CFBP00751 764 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 ERVK-21P61565 698 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 DEFB103AP81534 67 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 IKBKEQ14164 716 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 IMMTQ16891 758 aaKnown RBP15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 KIAA0753Q2KHM9 967 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 TCTN1Q2MV58 587 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 TRIM71Q2Q1W2 868 aaKnown RBP15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 MYSM1Q5VVJ2 828 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 KCNV1Q6PIU1 500 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 TRAF7Q6Q0C0 670 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 STOX1Q6ZVD7 989 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 TMCO2Q7Z6W1 182 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 CHD1LQ86WJ1 897 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 MTMR8Q96EF0 704 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 ALG1Q9BT22 464 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 KRT23Q9C075 422 aa15.24■□□□□ 0.03
TRAPPC3-201ENST00000373159 RWDD1Q9H446 243 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms