RNA–Protein interactions for RNA: ENST00000372616.1

CTPS1-201, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-201ENST00000372616 SMIM5Q71RC9 77 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 DPH6Q7L8W6 267 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 COL23A1Q86Y22 540 aaPredicted RBP8.04□□□□□ -1.12
CTPS1-201ENST00000372616 FAM76AQ8TAV0 307 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 SEC62Q99442 399 aaKnown RBP8.04□□□□□ -1.12
CTPS1-201ENST00000372616 MAP3K14Q99558 947 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 PUS3Q9BZE2 481 aaKnown RBP8.04□□□□□ -1.12
CTPS1-201ENST00000372616 HAUS4Q9H6D7 363 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 CAPN10Q9HC96 672 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 INTS13Q9NVM9 706 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 MAN1B1Q9UKM7 699 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 ARAP2Q8WZ64 1704 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 NRXN2Q9P2S2 1712 aa8.04□□□□□ -1.12
CTPS1-201ENST00000372616 POTEMA6NI47 508 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 GOLGA8KD6RF30 607 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 FSHRP23945 695 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 MARCKSP29966 332 aaPredicted RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 IARSP41252 1262 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 RCAN1P53805 252 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PPFIA1Q13136 1202 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 KARSQ15046 597 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PUM3Q15397 648 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 LONRF3Q496Y0 759 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 KRT40Q6A162 431 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 SPATA20Q8TB22 786 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 COG1Q8WTW3 980 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 LPIN2Q92539 896 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 EDC3Q96F86 508 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 GSDMAQ96QA5 445 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 MTA3Q9BTC8 594 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 C2orf49Q9BVC5 232 aaPredicted RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 FOXP1Q9H334 677 aaPredicted RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 LZTFL1Q9NQ48 299 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 BSDC1Q9NW68 430 aaPredicted RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PUF60Q9UHX1 559 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 POLIQ9UNA4 740 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 SYNRGQ9UMZ2 1314 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PSMD14O00487 310 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 CLGNO14967 610 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 IPO7O95373 1038 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 MYH7P12883 1935 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 SLC5A1P13866 664 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 MMP14P50281 582 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 RPS8P62241 208 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 VSNL1P62760 191 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 KRT83P78385 493 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 STIM1Q13586 685 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 NID2Q14112 1375 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PPP2R5BQ15173 497 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PLA2G2CQ5R387 149 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PRR5LQ6MZQ0 368 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PNPLA7Q6ZV29 1317 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 TMC4Q7Z404 712 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 NOSTRINQ8IVI9 506 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 AMOTL1Q8IY63 956 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 TRIM22Q8IYM9 498 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 APPBP2Q92624 585 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 IQCDQ96DY2 449 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 ZNF512BQ96KM6 892 aaPredicted RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PNKPQ96T60 521 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 ANKRD2Q9GZV1 360 aa8.03□□□□□ -1.12
CTPS1-201ENST00000372616 MRPL44Q9H9J2 332 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 A1CFQ9NQ94 594 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 ZNHIT6Q9NWK9 470 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 ADD3Q9UEY8 706 aaKnown RBP8.03□□□□□ -1.12
CTPS1-201ENST00000372616 PNMA6FA0A0J9YX94 578 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 ANO9A1A5B4 782 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 KIF28PB7ZC32 967 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 POLRMTO00411 1230 aaKnown RBP8.02□□□□□ -1.13
CTPS1-201ENST00000372616 UQCRFS1P1P0C7P4 283 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 XBP1P17861 261 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 PBX1P40424 430 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 ARHGAP25P42331 645 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 USP14P54578 494 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 APBA1Q02410 837 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 ITIH3Q06033 890 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 SGMS1Q86VZ5 419 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 VGLL2Q8N8G2 317 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 SLC16A10Q8TF71 515 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 RPGRQ92834 1020 aaKnown RBP8.02□□□□□ -1.13
CTPS1-201ENST00000372616 EPC1Q9H2F5 836 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 SEC31BQ9NQW1 1179 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 SCHIP1Q9P0W5 487 aaPredicted RBP8.02□□□□□ -1.13
CTPS1-201ENST00000372616 SRRM3A6NNA2 597 aaPredicted RBP8.02□□□□□ -1.13
CTPS1-201ENST00000372616 ZBTB43O43298 467 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 KIAA0754O94854 1291 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 RHOXF2BP0C7M4 288 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 GYS2P54840 703 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 TIMM10P62072 90 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 DAB2P98082 770 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 SSRP1Q08945 709 aaKnown RBP8.02□□□□□ -1.13
CTPS1-201ENST00000372616 UBE4AQ14139 1066 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 TTF1Q15361 905 aaPredicted RBP8.02□□□□□ -1.13
CTPS1-201ENST00000372616 CRY2Q49AN0 593 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 CDKAL1Q5VV42 579 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 ISM2Q6H9L7 571 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 SLC35F6Q8N357 371 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 STAG1Q8WVM7 1258 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 XAGE2Q96GT9 111 aa8.02□□□□□ -1.13
CTPS1-201ENST00000372616 RBM17Q96I25 401 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms