RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SREBF2Q12772 1141 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 TMEM67Q5HYA8 995 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 KIAA1755Q5JYT7 1200 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 WDR93Q6P2C0 686 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 FASTKD5Q7L8L6 764 aaKnown RBP12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 GOLGA6L1Q8N7Z2 621 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 ENAHQ8N8S7 591 aaPredicted RBP12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 TMEM47Q9BQJ4 181 aa12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 MRPL44Q9H9J2 332 aaKnown RBP12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 ZCCHC17Q9NP64 241 aaKnown RBP12.83□□□□□ -0.36
TSPAN1-201ENST00000372003 F5H6K3 240 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 H3BQF6 201 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 BMP15O95972 392 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 LMAN1P49257 510 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 INHBEP58166 350 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 KLRC3Q07444 240 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 GOLGA8FQ08AF8 430 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 GOLGA8DPQ0D2H9 430 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 MOGSQ13724 837 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 SART3Q15020 963 aaKnown RBP12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 PPP2R5BQ15173 497 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 SH3D19Q5HYK7 790 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 TREML2Q5T2D2 321 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 IFIT1BQ5T764 474 aaKnown RBP12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 CDKAL1Q5VV42 579 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 RCSD1Q6JBY9 416 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 APTXQ7Z2E3 356 aaKnown RBP12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 DGKHQ86XP1 1220 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 CTCFLQ8NI51 663 aaPredicted RBP12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 MKL1Q969V6 931 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 VCPKMTQ9H867 229 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 GOPCQ9HD26 462 aa12.82□□□□□ -0.36
TSPAN1-201ENST00000372003 CCDC196A0A1B0GTZ2 297 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 CTAGE15A4D2H0 777 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 BTBD19C9JJ37 291 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 IGF2BP3O00425 579 aaKnown RBP eCLIP12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 MFAP3LO75121 409 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 CTAGE8P0CG41 777 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 TM4SF4P48230 202 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 SPAG1Q07617 926 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 WTAPQ15007 396 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 HSP90B2PQ58FF3 399 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 CTAGE6Q86UF2 777 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 CTAGE4Q8IX94 777 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 TRIM22Q8IYM9 498 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 TMTC2Q8N394 836 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 IGSF22Q8N9C0 903 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 AIFM3Q96NN9 605 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 GSDMAQ96QA5 445 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 NUP88Q99567 741 aaPredicted RBP12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 NAPGQ99747 312 aaPredicted RBP12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 PYM1Q9BRP8 204 aaKnown RBP12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 EPC1Q9H2F5 836 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 KAT14Q9H8E8 782 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 LY9Q9HBG7 655 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 SENP2Q9HC62 589 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 FAM217BQ9NTX9 383 aaPredicted RBP12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 ADD3Q9UEY8 706 aaKnown RBP12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 SERTAD1Q9UHV2 236 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 DOCK1Q14185 1865 aa12.81□□□□□ -0.36
TSPAN1-201ENST00000372003 PDHXO00330 501 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 POLR2DO15514 142 aaKnown RBP12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 NDUFB10O96000 172 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 VCAM1P19320 739 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 NOVP48745 357 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 KARSQ15046 597 aaKnown RBP12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 SEC23AQ15436 765 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 SLFN13Q68D06 897 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 GPAT2Q6NUI2 795 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 RAD9BQ6WBX8 426 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 NFXL1Q6ZNB6 911 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 SH3RF1Q7Z6J0 888 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 PROCA1Q8NCQ7 364 aaPredicted RBP12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 RPGRIP1Q96KN7 1286 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 RRP15Q9Y3B9 282 aaKnown RBP12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 LRRC10BA6NIK2 292 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 SOWAHDA6NJG2 315 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 DEXIO95424 95 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 AARSP49588 968 aaKnown RBP eCLIP12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 TOB1P50616 345 aaPredicted RBP12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 CUL4BQ13620 913 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 MAP9Q49MG5 647 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 ZNF662Q6ZS27 426 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 PNMA1Q8ND90 353 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 TANGO6Q9C0B7 1094 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 RPAP3Q9H6T3 665 aaPredicted RBP12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 PDE11AQ9HCR9 933 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 SAMSN1Q9NSI8 373 aaKnown RBP12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 AGTPBP1Q9UPW5 1226 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
TSPAN1-201ENST00000372003 SYNRGQ9UMZ2 1314 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 FOXN1O15353 648 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 PRR29P0C7W0 189 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 MAGEA9P43362 315 aa12.79□□□□□ -0.36
TSPAN1-201ENST00000372003 RBL2Q08999 1139 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms