RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 H0YIN7 160 aa32.24■■■□□ 2.75
SSBP3-204ENST00000371320 ECM1Q16610 540 aa32.24■■■□□ 2.75
SSBP3-204ENST00000371320 MEA1Q16626 185 aa32.24■■■□□ 2.75
SSBP3-204ENST00000371320 SRGAP1Q7Z6B7 1085 aa32.24■■■□□ 2.75
SSBP3-204ENST00000371320 NAPGQ99747 312 aaPredicted RBP32.24■■■□□ 2.75
SSBP3-204ENST00000371320 HOXA7P31268 230 aaPredicted RBP32.23■■■□□ 2.75
SSBP3-204ENST00000371320 ZBED6P86452 979 aa32.23■■■□□ 2.75
SSBP3-204ENST00000371320 PSMD2Q13200 908 aa32.23■■■□□ 2.75
SSBP3-204ENST00000371320 CDC37Q16543 378 aaPredicted RBP32.23■■■□□ 2.75
SSBP3-204ENST00000371320 CEP112Q8N8E3 955 aa32.23■■■□□ 2.75
SSBP3-204ENST00000371320 ERGIC2Q96RQ1 377 aa32.23■■■□□ 2.75
SSBP3-204ENST00000371320 ZNF219Q9P2Y4 722 aaPredicted RBP32.23■■■□□ 2.75
SSBP3-204ENST00000371320 FGFR1OPO95684 399 aaKnown RBP32.23■■■□□ 2.75
SSBP3-204ENST00000371320 SEPT2Q15019 361 aa32.23■■■□□ 2.75
SSBP3-204ENST00000371320 STYK1Q6J9G0 422 aa32.23■■■□□ 2.75
SSBP3-204ENST00000371320 TATDN1Q6P1N9 297 aa32.23■■■□□ 2.75
SSBP3-204ENST00000371320 CHMP4BP1P59074 171 aa32.22■■■□□ 2.75
SSBP3-204ENST00000371320 SERPINA10Q9UK55 444 aa32.22■■■□□ 2.75
SSBP3-204ENST00000371320 ICA1Q05084 483 aa32.22■■■□□ 2.75
SSBP3-204ENST00000371320 LRRC63Q05C16 580 aa32.22■■■□□ 2.75
SSBP3-204ENST00000371320 FHOD1Q9Y613 1164 aa32.22■■■□□ 2.75
SSBP3-204ENST00000371320 NPM3O75607 178 aaKnown RBP32.21■■■□□ 2.75
SSBP3-204ENST00000371320 USP11P51784 963 aa32.21■■■□□ 2.75
SSBP3-204ENST00000371320 EHHADHQ08426 723 aa32.21■■■□□ 2.75
SSBP3-204ENST00000371320 TMEM179Q6ZVK1 233 aa32.21■■■□□ 2.75
SSBP3-204ENST00000371320 NT5C3AQ9H0P0 336 aa32.21■■■□□ 2.75
SSBP3-204ENST00000371320 ZSWIM4Q9H7M6 989 aa32.21■■■□□ 2.75
SSBP3-204ENST00000371320 GUCA1BQ9UMX6 200 aa32.21■■■□□ 2.75
SSBP3-204ENST00000371320 KDM3AQ9Y4C1 1321 aa32.21■■■□□ 2.75
SSBP3-204ENST00000371320 ZRANB2O95218 330 aaKnown RBP eCLIP32.2■■■□□ 2.754e-7■■■□□ 14.7
SSBP3-204ENST00000371320 KRT83P78385 493 aa32.2■■■□□ 2.75
SSBP3-204ENST00000371320 VWA3BQ502W6 1294 aa32.2■■■□□ 2.75
SSBP3-204ENST00000371320 FIGNQ5HY92 759 aa32.2■■■□□ 2.75
SSBP3-204ENST00000371320 SIAH1Q8IUQ4 282 aa32.2■■■□□ 2.75
SSBP3-204ENST00000371320 ANO3Q9BYT9 981 aa32.2■■■□□ 2.75
SSBP3-204ENST00000371320 HAUS4Q9H6D7 363 aa32.2■■■□□ 2.75
SSBP3-204ENST00000371320 PUF60Q9UHX1 559 aaKnown RBP32.2■■■□□ 2.75
SSBP3-204ENST00000371320 NKRFO15226 690 aaKnown RBP eCLIP32.2■■■□□ 2.74
SSBP3-204ENST00000371320 HYIQ5T013 277 aa32.2■■■□□ 2.74
SSBP3-204ENST00000371320 SIPA1L1O43166 1804 aa32.2■■■□□ 2.74
SSBP3-204ENST00000371320 MYH7BA7E2Y1 1941 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 A0A1W2PQJ5 194 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 CYLC1P35663 651 aaPredicted RBP32.19■■■□□ 2.74
SSBP3-204ENST00000371320 IQCDQ96DY2 449 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 BMP2KQ9NSY1 1161 aaPredicted RBP32.19■■■□□ 2.74
SSBP3-204ENST00000371320 PNMA6AP0CW24 399 aaPredicted RBP32.19■■■□□ 2.74
SSBP3-204ENST00000371320 HERVK_113P62684 666 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 DNAJC19Q96DA6 116 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 TSG101Q99816 390 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 PARD6BQ9BYG5 372 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 ZMYND15Q9H091 742 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 NDST4Q9H3R1 872 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 TRIM10Q9UDY6 481 aa32.19■■■□□ 2.74
SSBP3-204ENST00000371320 F5H6K3 240 aa32.18■■■□□ 2.74
SSBP3-204ENST00000371320 GDF11O95390 407 aa32.18■■■□□ 2.74
SSBP3-204ENST00000371320 KLRC3Q07444 240 aa32.18■■■□□ 2.74
SSBP3-204ENST00000371320 LRRC41Q15345 812 aa32.18■■■□□ 2.74
SSBP3-204ENST00000371320 ABCB5Q2M3G0 1257 aa32.18■■■□□ 2.74
SSBP3-204ENST00000371320 ABCB11O95342 1321 aa32.18■■■□□ 2.74
SSBP3-204ENST00000371320 SSBP05455 408 aaKnown RBP eCLIP32.17■■■□□ 2.74
SSBP3-204ENST00000371320 MAN2A1Q16706 1144 aa32.17■■■□□ 2.74
SSBP3-204ENST00000371320 CCDC170Q8IYT3 715 aa32.17■■■□□ 2.74
SSBP3-204ENST00000371320 UIMC1Q96RL1 719 aa32.17■■■□□ 2.74
SSBP3-204ENST00000371320 NHEJ1Q9H9Q4 299 aaPredicted RBP32.17■■■□□ 2.74
SSBP3-204ENST00000371320 KCNMB3Q9NPA1 279 aa32.17■■■□□ 2.74
SSBP3-204ENST00000371320 CYP3A7-CYP3A51PA0A087WV96 503 aa32.17■■■□□ 2.74
SSBP3-204ENST00000371320 CYP3A7P24462 503 aa32.17■■■□□ 2.74
SSBP3-204ENST00000371320 DMTNQ08495 405 aa32.17■■■□□ 2.74
SSBP3-204ENST00000371320 COASYQ13057 564 aa32.17■■■□□ 2.74
SSBP3-204ENST00000371320 KIAA1024Q9UPX6 916 aa32.17■■■□□ 2.74
SSBP3-204ENST00000371320 AP3B2Q13367 1082 aa32.16■■■□□ 2.74
SSBP3-204ENST00000371320 MYOCDQ8IZQ8 938 aa32.16■■■□□ 2.74
SSBP3-204ENST00000371320 GLIS3Q8NEA6 775 aa32.16■■■□□ 2.74
SSBP3-204ENST00000371320 AMNQ9BXJ7 453 aa32.16■■■□□ 2.74
SSBP3-204ENST00000371320 PANK4Q9NVE7 773 aa32.16■■■□□ 2.74
SSBP3-204ENST00000371320 MEIS2O14770 477 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 AOC3Q16853 763 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 WHAMMP3Q1A5X7 153 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 CCDC122Q5T0U0 273 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 KIAA1328Q86T90 577 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 GMCL1P1Q8NEA9 526 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 TDRD3Q9H7E2 651 aaKnown RBP32.15■■■□□ 2.74
SSBP3-204ENST00000371320 SCN9AQ15858 1988 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 SEC31AO94979 1220 aaKnown RBP32.15■■■□□ 2.74
SSBP3-204ENST00000371320 IPO7O95373 1038 aaKnown RBP32.15■■■□□ 2.74
SSBP3-204ENST00000371320 FOXR2Q6PJQ5 311 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 LRRC55Q6ZSA7 311 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 MBOAT7Q96N66 472 aa32.15■■■□□ 2.74
SSBP3-204ENST00000371320 E9PMD0 336 aa32.14■■■□□ 2.74
SSBP3-204ENST00000371320 CHRNA5P30532 468 aa32.14■■■□□ 2.74
SSBP3-204ENST00000371320 SNAP25P60880 206 aa32.14■■■□□ 2.74
SSBP3-204ENST00000371320 CDK17Q00537 523 aa32.14■■■□□ 2.74
SSBP3-204ENST00000371320 GABPB1Q06547 395 aaPredicted RBP32.14■■■□□ 2.74
SSBP3-204ENST00000371320 IKQ13123 557 aaPredicted RBP32.14■■■□□ 2.74
SSBP3-204ENST00000371320 CC2D1AQ6P1N0 951 aaPredicted RBP32.14■■■□□ 2.74
SSBP3-204ENST00000371320 ZNF662Q6ZS27 426 aa32.14■■■□□ 2.74
SSBP3-204ENST00000371320 SLFN12Q8IYM2 578 aa32.14■■■□□ 2.74
SSBP3-204ENST00000371320 GMCL1Q96IK5 515 aa32.14■■■□□ 2.74
SSBP3-204ENST00000371320 SIK3Q9Y2K2 1263 aa32.14■■■□□ 2.74
SSBP3-204ENST00000371320 EIF3CLB5ME19 914 aaKnown RBP32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms