RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 SPIRE1Q08AE8 756 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 ECM1Q16610 540 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 HYIQ5T013 277 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 CATSPERGQ6ZRH7 1159 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 MCF2L2Q86YR7 1114 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 CYP2W1Q8TAV3 490 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 FAM20AQ96MK3 541 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 C7orf25Q9BPX7 421 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 RMND1Q9NWS8 449 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 TMOD4Q9NZQ9 345 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 PNMA2Q9UL42 364 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 LOC285556D6RIA3 1793 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 SLC26A4O43511 780 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 PTMAP06454 111 aaKnown RBP19.7■□□□□ 0.74
SSBP3-203ENST00000371319 ERCC5P28715 1186 aaPredicted RBP19.7■□□□□ 0.74
SSBP3-203ENST00000371319 ZNF76P36508 570 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 ENOX1Q8TC92 643 aaKnown RBP19.7■□□□□ 0.74
SSBP3-203ENST00000371319 MRFAP1L1Q96HT8 127 aa19.7■□□□□ 0.74
SSBP3-203ENST00000371319 TAF1DQ9H5J8 278 aaPredicted RBP19.7■□□□□ 0.74
SSBP3-203ENST00000371319 POTECB2RU33 542 aa19.69■□□□□ 0.74
SSBP3-203ENST00000371319 STAT3P40763 770 aa19.69■□□□□ 0.74
SSBP3-203ENST00000371319 IREB2P48200 963 aaKnown RBP19.69■□□□□ 0.74
SSBP3-203ENST00000371319 UBXN2AP68543 259 aa19.69■□□□□ 0.74
SSBP3-203ENST00000371319 KCNB1Q14721 858 aa19.69■□□□□ 0.74
SSBP3-203ENST00000371319 ZNF658Q5TYW1 1059 aaPredicted RBP19.69■□□□□ 0.74
SSBP3-203ENST00000371319 SMYD4Q8IYR2 804 aaPredicted RBP19.69■□□□□ 0.74
SSBP3-203ENST00000371319 SAMD3Q8N6K7 520 aa19.69■□□□□ 0.74
SSBP3-203ENST00000371319 CNKSR2Q8WXI2 1034 aa19.69■□□□□ 0.74
SSBP3-203ENST00000371319 RAD54LQ92698 747 aa19.69■□□□□ 0.74
SSBP3-203ENST00000371319 CDK5RAP3Q96JB5 506 aa19.69■□□□□ 0.74
SSBP3-203ENST00000371319 CTDP1Q9Y5B0 961 aaPredicted RBP19.69■□□□□ 0.74
SSBP3-203ENST00000371319 CSADQ9Y600 493 aa19.69■□□□□ 0.74
SSBP3-203ENST00000371319 MCM6Q14566 821 aa19.68■□□□□ 0.74
SSBP3-203ENST00000371319 COG2Q14746 738 aa19.68■□□□□ 0.74
SSBP3-203ENST00000371319 KMT5BQ4FZB7 885 aa19.68■□□□□ 0.74
SSBP3-203ENST00000371319 KCNK18Q7Z418 384 aa19.68■□□□□ 0.74
SSBP3-203ENST00000371319 TRMT44Q8IYL2 757 aaKnown RBP19.68■□□□□ 0.74
SSBP3-203ENST00000371319 SPC24Q8NBT2 197 aa19.68■□□□□ 0.74
SSBP3-203ENST00000371319 RBM46Q8TBY0 533 aaKnown RBP19.68■□□□□ 0.74
SSBP3-203ENST00000371319 TRIM9Q9C026 710 aa19.68■□□□□ 0.74
SSBP3-203ENST00000371319 FANCLQ9NW38 375 aa19.68■□□□□ 0.74
SSBP3-203ENST00000371319 MAP3K20Q9NYL2 800 aaKnown RBP19.68■□□□□ 0.74
SSBP3-203ENST00000371319 VAV3Q9UKW4 847 aa19.68■□□□□ 0.74
SSBP3-203ENST00000371319 CCT6AP40227 531 aaKnown RBP19.67■□□□□ 0.74
SSBP3-203ENST00000371319 OAZ1P54368 228 aa19.67■□□□□ 0.74
SSBP3-203ENST00000371319 SV2BQ7L1I2 683 aa19.67■□□□□ 0.74
SSBP3-203ENST00000371319 SYTL5Q8TDW5 730 aaPredicted RBP19.67■□□□□ 0.74
SSBP3-203ENST00000371319 LARP4BQ92615 738 aaKnown RBP19.67■□□□□ 0.74
SSBP3-203ENST00000371319 TRERF1Q96PN7 1200 aa19.67■□□□□ 0.74
SSBP3-203ENST00000371319 HOMER2Q9NSB8 354 aa19.67■□□□□ 0.74
SSBP3-203ENST00000371319 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.67■□□□□ 0.74
SSBP3-203ENST00000371319 FRMPD4Q14CM0 1322 aa19.67■□□□□ 0.74
SSBP3-203ENST00000371319 KDM3AQ9Y4C1 1321 aa19.67■□□□□ 0.74
SSBP3-203ENST00000371319 ESPNB1AK53 854 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 RHOBTB3O94955 611 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 ATP1A3P13637 1013 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 SEMA3FQ13275 785 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 SLC5A5Q92911 643 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.66■□□□□ 0.74
SSBP3-203ENST00000371319 GDAQ9Y2T3 454 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 RIPK3Q9Y572 518 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 A0A0G2JMZ2 1700 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 MYPNQ86TC9 1320 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 SPDYE16A6NNV3 312 aaPredicted RBP19.66■□□□□ 0.74
SSBP3-203ENST00000371319 MED24O75448 989 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 FANCCQ00597 558 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 AMPD3Q01432 767 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 TMEM132BQ14DG7 1078 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 CEP55Q53EZ4 464 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 NCAPH2Q6IBW4 605 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 SLC30A10Q6XR72 485 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 MOB2Q70IA6 237 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 ZSCAN30Q86W11 494 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 ELP3Q9H9T3 547 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 ZNF214Q9UL59 606 aaPredicted RBP19.66■□□□□ 0.74
SSBP3-203ENST00000371319 RABGAP1Q9Y3P9 1069 aa19.66■□□□□ 0.74
SSBP3-203ENST00000371319 IQCA1LA6NCM1 817 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 MYMKA6NI61 221 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 MEIS1O00470 390 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 ATP2A1O14983 1001 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 ZNF18P17022 549 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 NF2P35240 595 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 EAPPQ56P03 285 aaPredicted RBP19.65■□□□□ 0.74
SSBP3-203ENST00000371319 TREML2Q5T2D2 321 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 KLHL10Q6JEL2 608 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 CNNM4Q6P4Q7 775 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 IL31RAQ8NI17 732 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 CLMNQ96JQ2 1002 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 MXRA8Q9BRK3 442 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 NT5C3AQ9H0P0 336 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 RNF146Q9NTX7 359 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 IFNKQ9P0W0 207 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 CTNND2Q9UQB3 1225 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 NFE2L3Q9Y4A8 694 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 SYNRGQ9UMZ2 1314 aa19.65■□□□□ 0.74
SSBP3-203ENST00000371319 POTEB3A0JP26 581 aa19.64■□□□□ 0.73
SSBP3-203ENST00000371319 RPS6P62753 249 aaKnown RBP19.64■□□□□ 0.73
SSBP3-203ENST00000371319 ASIC1P78348 528 aa19.64■□□□□ 0.73
SSBP3-203ENST00000371319 PPATQ06203 517 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms