RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 PPP1R21Q6ZMI0 780 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 ATG9AQ7Z3C6 839 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 RAB20Q9NX57 234 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 PNPLA7Q6ZV29 1317 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 SOWAHDA6NJG2 315 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 PRDX5P30044 214 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 ATP11AP98196 1134 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 SPICE1Q8N0Z3 855 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 ANKRD35Q8N283 1001 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 PPRC1Q5VV67 1664 aaKnown RBP12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 GSG1L2A8MUP6 293 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 PLA2G4BP0C869 781 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 DLATP10515 647 aaKnown RBP12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 NSFP46459 744 aaKnown RBP12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 STAT2P52630 851 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 EPHB4P54760 987 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 PRKG1Q13976 671 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 SYNE4Q8N205 404 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 POMGNT1Q8WZA1 660 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 STMN2Q93045 179 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 RSRC1Q96IZ7 334 aaKnown RBP12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 PDE11AQ9HCR9 933 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 RIPOR2Q9Y4F9 1068 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 SNAP23O00161 211 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 TNNC2P02585 160 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 ABCD1P33897 745 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 KCNQ4P56696 695 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 SYDE2Q5VT97 1194 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 ACRBPQ8NEB7 543 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 CDHR1Q96JP9 859 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 CAPS2Q9BXY5 557 aa12.95□□□□□ -0.34
DEPDC1-201ENST00000370966 MYO1FO00160 1098 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 IFNB1P01574 187 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 NPR1P16066 1061 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 AP3B2Q13367 1082 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 MB21D1Q8N884 522 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 MRRFQ96E11 262 aaKnown RBP12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 HNRNPDLO14979 420 aaKnown RBP12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 POLGP54098 1239 aaPredicted RBP12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 BCAS4Q8TDM0 211 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 ACCSQ96QU6 501 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 TMEM47Q9BQJ4 181 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 GOLPH3LQ9H4A5 285 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 RABEP2Q9H5N1 569 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 DBNDD1Q9H9R9 158 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 TBC1D8O95759 1140 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 HSPA6P17066 643 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 MAN1A1P33908 653 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 USP14P54578 494 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 UNC13DQ70J99 1090 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 FAM160B2Q86V87 743 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 RNF34Q969K3 372 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 TRIM11Q96F44 468 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 PSMD1Q99460 953 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 DPH5Q9H2P9 285 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 PLEKHA4Q9H4M7 779 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 NHEJ1Q9H9Q4 299 aaPredicted RBP12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 PARVGQ9HBI0 331 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 FAM114A2Q9NRY5 505 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 PASKQ96RG2 1323 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 CAMSAP1Q5T5Y3 1602 aa12.94□□□□□ -0.34
DEPDC1-201ENST00000370966 SERPING1P05155 500 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 CDC27P30260 824 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 STX2P32856 288 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 COL15A1P39059 1388 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 ADCY8P40145 1251 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 PPP1R2P3Q6NXS1 205 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 UBN2Q6ZU65 1347 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 TMEM179Q6ZVK1 233 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 SPATA24Q86W54 205 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 SMCR8Q8TEV9 937 aaPredicted RBP12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 ADPGKQ9BRR6 497 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 VPS37BQ9H9H4 285 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 PPANQ9NQ55 473 aaKnown RBP12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 IQSEC2Q5JU85 1478 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 CPDO75976 1380 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 PVALEFA0A1B0GWK0 134 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 ADRA2BP18089 450 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 EIF4A3P38919 411 aaKnown RBP12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 HACE1Q8IYU2 909 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 CACNA2D3Q8IZS8 1091 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 ARHGAP24Q8N264 748 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 RAB3IL1Q8TBN0 382 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 MXD3Q9BW11 206 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 ANO3Q9BYT9 981 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 ST7Q9NRC1 585 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 NOD1Q9Y239 953 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 NEXMIFQ5QGS0 1516 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 PGRMC1O00264 195 aaKnown RBP12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 TMEM191BP0C7N4 346 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 PTPN21Q16825 1174 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 KRT12Q99456 494 aa12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 JPH2Q9BR39 696 aaPredicted RBP12.93□□□□□ -0.34
DEPDC1-201ENST00000370966 ORC4O43929 436 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms