RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PTCD1O75127 700 aaKnown RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 AGR2O95994 175 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 IL15P40933 162 aaPredicted RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 CRKLP46109 303 aaKnown RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 CTSWP56202 376 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 TNNI3KQ59H18 835 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 CDC37L1Q7L3B6 337 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 SAPCD2Q86UD0 394 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 AMIGO3Q86WK7 504 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 ZNF606Q8WXB4 792 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 BLOC1S6Q9UL45 172 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 MAPRE3Q9UPY8 281 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 FPGT-TNNI3KV9GXZ4 949 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 CCDC171Q6TFL3 1326 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 POTEMA6NI47 508 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 PDE8AO60658 829 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 FAM13AO94988 1023 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 UBTFL1P0CB47 393 aaPredicted RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 POU3F2P20265 443 aaPredicted RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 PAPOLAP51003 745 aaKnown RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 CYP4A11Q02928 519 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 IFFO2Q5TF58 517 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 POTEGQ6S5H5 508 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 SNX32Q86XE0 403 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 SLC41A1Q8IVJ1 513 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 DNAJC10Q8IXB1 793 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 NRSN1Q8IZ57 195 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 FAM169BQ8N8A8 192 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 CHMP4CQ96CF2 233 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 EAF2Q96CJ1 260 aaPredicted RBP4.5□□□□□ -1.69
MCF2-203ENST00000370576 MFSD3Q96ES6 412 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 RBSNQ9H1K0 784 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 PDLIM7Q9NR12 457 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 PCDHGC5Q9Y5F6 944 aa4.5□□□□□ -1.69
MCF2-203ENST00000370576 APPP05067 770 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 SLC39A6Q13433 755 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 HLFQ16534 295 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 ZMYM1Q5SVZ6 1142 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 HECTD3Q5T447 861 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 MEX3CQ5U5Q3 659 aaKnown RBP4.49□□□□□ -1.69
MCF2-203ENST00000370576 OTUD7AQ8TE49 926 aaPredicted RBP4.49□□□□□ -1.69
MCF2-203ENST00000370576 KISS1RQ969F8 398 aaPredicted RBP4.49□□□□□ -1.69
MCF2-203ENST00000370576 HIC2Q96JB3 615 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 OSBPL7Q9BZF2 842 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 HELLSQ9NRZ9 838 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 TBC1D22BQ9NU19 505 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 MRVI1Q9Y6F6 885 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 TRIM6-TRIM34B2RNG4 842 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 STXBP3O00186 592 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 STARD3NLO95772 234 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 CD4P01730 458 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 PRKAR2AP13861 404 aaKnown RBP4.49□□□□□ -1.69
MCF2-203ENST00000370576 SMARCA1P28370 1054 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 USP14P54578 494 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 ST3GAL1Q11201 340 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 STK3Q13188 491 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 TCEA2Q15560 299 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 C16orf87Q6PH81 154 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 PADI6Q6TGC4 694 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 PAF1Q8N7H5 531 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 NAXEQ8NCW5 288 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 C7orf43Q8WVR3 580 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 ATRIPQ8WXE1 791 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 ZMAT2Q96NC0 199 aaKnown RBP4.49□□□□□ -1.69
MCF2-203ENST00000370576 DSCC1Q9BVC3 393 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 MRPL9Q9BYD2 267 aaKnown RBP4.49□□□□□ -1.69
MCF2-203ENST00000370576 DBNLQ9UJU6 430 aaKnown RBP4.49□□□□□ -1.69
MCF2-203ENST00000370576 ZBTB1Q9Y2K1 713 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 MCF2LO15068 1137 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 PDPK1O15530 556 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 TLR5O60602 858 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 ADAMTS4O75173 837 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 GLRX3O76003 335 aaKnown RBP4.49□□□□□ -1.69
MCF2-203ENST00000370576 GUCY2FP51841 1108 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 C7orf61Q8IZ16 206 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 PHC3Q8NDX5 983 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 CHAC2Q8WUX2 184 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 NBPF3Q9H094 633 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 UTP6Q9NYH9 597 aaKnown RBP4.49□□□□□ -1.69
MCF2-203ENST00000370576 ZNF232Q9UNY5 417 aa4.49□□□□□ -1.69
MCF2-203ENST00000370576 HIP1O00291 1037 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 GPR39O43194 453 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 AKR1B10O60218 316 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 ADRB2P07550 413 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 XPAP23025 273 aaPredicted RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 RPS6KB1P23443 525 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 RGS3P49796 1198 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 MYBPC3Q14896 1274 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 CWF19L2Q2TBE0 894 aaKnown RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 ATP13A4Q4VNC1 1196 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 PKDCCQ504Y2 493 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 FAM180BQ6P0A1 224 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 CPLX2Q6PUV4 134 aaKnown RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 EPM2AIP1Q7L775 607 aaPredicted RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 GABPB2Q8TAK5 448 aaPredicted RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 ANKS1AQ92625 1134 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 LZTS2Q9BRK4 669 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 CYP4F11Q9HBI6 524 aa4.48□□□□□ -1.69
MCF2-203ENST00000370576 TRMT13Q9NUP7 481 aaKnown RBP4.48□□□□□ -1.69
MCF2-203ENST00000370576 DNAAF2Q9NVR5 837 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms