RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CFAP36Q96G28 342 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 SLC5A4Q9NY91 659 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 CCNL1Q9UK58 526 aaPredicted RBP13.49□□□□□ -0.25
HCFC1-202ENST00000369984 JRKLQ9Y4A0 524 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 TLR3O15455 904 aaKnown RBP13.49□□□□□ -0.25
HCFC1-202ENST00000369984 PGBD1Q96JS3 809 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 USP28Q96RU2 1077 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 TM6SF1Q9BZW5 370 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 SUGCTQ9HAC7 445 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 KIF9Q9HAQ2 790 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 SLC4A1P02730 911 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 PARD3BQ8TEW8 1205 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 TBC1D22AQ8WUA7 517 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 HEXIM1O94992 359 aaKnown RBP13.49□□□□□ -0.25
HCFC1-202ENST00000369984 USP19O94966 1318 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 ACTN1P12814 892 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 LRRC47Q8N1G4 583 aaKnown RBP13.48□□□□□ -0.25
HCFC1-202ENST00000369984 TRIM11Q96F44 468 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 TRAIPQ9BWF2 469 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 H3BRJ5 948 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 RBL2Q08999 1139 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 TRIM59Q8IWR1 403 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 ANKRD36BP1Q96IX9 119 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 LRRN2O75325 713 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 GCP02774 474 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 CTSWP56202 376 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 FBXL13Q8NEE6 735 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 SDR42E1Q8WUS8 393 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 TTC1Q99614 292 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 RTEL1Q9NZ71 1219 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 PCDHA7Q9UN72 937 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 KIAA1024Q9UPX6 916 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 THRAP3Q9Y2W1 955 aaKnown RBP13.48□□□□□ -0.25
HCFC1-202ENST00000369984 GPATCH8Q9UKJ3 1502 aaKnown RBP13.48□□□□□ -0.25
HCFC1-202ENST00000369984 SCG2P13521 617 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 NPR1P16066 1061 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 PLTPP55058 493 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 AOC3Q16853 763 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 GJA10Q969M2 543 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 BABAM1Q9NWV8 329 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 SUCLA2Q9P2R7 463 aaPredicted RBP13.48□□□□□ -0.25
HCFC1-202ENST00000369984 BPIFB4P59827 614 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 TRIM15Q9C019 465 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 SEPT9Q9UHD8 586 aaPredicted RBP13.48□□□□□ -0.25
HCFC1-202ENST00000369984 MRPL11Q9Y3B7 192 aaKnown RBP13.48□□□□□ -0.25
HCFC1-202ENST00000369984 A2MP01023 1474 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 PTPREP23469 700 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 TMEM259Q4ZIN3 620 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 ATG16L1Q676U5 607 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 MAGEF1Q9HAY2 307 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
HCFC1-202ENST00000369984 RYBPQ8N488 228 aaPredicted RBP13.47□□□□□ -0.25
HCFC1-202ENST00000369984 CCHCR1Q8TD31 782 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 WDR91A4D1P6 747 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 ATP5JP18859 108 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 PLS3P13797 630 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 DYNLT1P63172 113 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 DAB2P98082 770 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 DEUP1Q05D60 604 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 FMO2Q99518 471 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 SLC52A2Q9HAB3 445 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 USP40Q9NVE5 1235 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 GCNT4Q9P109 453 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 MFSD14BQ5SR56 506 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 SLC17A8Q8NDX2 589 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 RPS6KC1Q96S38 1066 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 ECEL1O95672 775 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 PAGR1Q9BTK6 254 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 AS3MTQ9HBK9 375 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 PACSIN2Q9UNF0 486 aaPredicted RBP13.47□□□□□ -0.25
HCFC1-202ENST00000369984 SLC4A7Q9Y6M7 1214 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 KLRF2D3W0D1 207 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 PGRMC1O00264 195 aaKnown RBP13.47□□□□□ -0.25
HCFC1-202ENST00000369984 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 CCNYQ8ND76 341 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 ZNF653Q96CK0 615 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 SLC38A10Q9HBR0 1119 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 TOM1O60784 492 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 ARHGDIAP52565 204 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 MCF2L2Q86YR7 1114 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 ST13P4Q8IZP2 240 aaPredicted RBP13.47□□□□□ -0.25
HCFC1-202ENST00000369984 PNMA1Q8ND90 353 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 TSC22D3Q99576 134 aa13.47□□□□□ -0.25
HCFC1-202ENST00000369984 MAPK13O15264 365 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 POLA2Q14181 598 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 KLC3Q6P597 504 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 RINLQ6ZS11 566 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 IFNL3Q8IZI9 196 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 ANKRD13CQ8N6S4 541 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 PRPF38AQ8NAV1 312 aaKnown RBP13.46□□□□□ -0.25
HCFC1-202ENST00000369984 RNF217Q8TC41 542 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 TLK1Q9UKI8 766 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 ARHGEF12Q9NZN5 1544 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 EXOC1LA0A1B0GW35 172 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 MCF2P10911 925 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 THOC5Q13769 683 aaKnown RBP13.46□□□□□ -0.25
HCFC1-202ENST00000369984 DARS2Q6PI48 645 aaKnown RBP13.46□□□□□ -0.25
HCFC1-202ENST00000369984 FANCBQ8NB91 859 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 IRAK4Q9NWZ3 460 aa13.46□□□□□ -0.25
HCFC1-202ENST00000369984 NRBP1Q9UHY1 535 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms