RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 SGSM3Q96HU1 749 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 TM6SF1Q9BZW5 370 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 CCDC90BQ9GZT6 254 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 EIF3HO15372 352 aaKnown RBP eCLIP9.29□□□□□ -0.92
LCA5-201ENST00000369846 PDE6AP16499 860 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 TOGARAM2Q6ZUX3 1019 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 FAM133AQ8N9E0 248 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 MIGA1Q8NAN2 632 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 ZNF473Q8WTR7 871 aaKnown RBP9.29□□□□□ -0.92
LCA5-201ENST00000369846 DNAJC9Q8WXX5 260 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 ZNF653Q96CK0 615 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 CCDC124Q96CT7 223 aaKnown RBP9.29□□□□□ -0.92
LCA5-201ENST00000369846 COQ7Q99807 217 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 ABCA6Q8N139 1617 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 SPHKAPQ2M3C7 1700 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 GON4LQ3T8J9 2241 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 B4DLN1 442 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 APOA1P02647 267 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 CASP2P42575 452 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 SEC24CP53992 1094 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 MED21Q13503 144 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 ART3Q13508 389 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 WDR44Q5JSH3 913 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 TRIML1Q8N9V2 468 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 SLC26A7Q8TE54 656 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 GRK7Q8WTQ7 553 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 HOOK2Q96ED9 719 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 DACH2Q96NX9 599 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 ING2Q9H160 280 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 ZFP69BQ9UJL9 534 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 ZBTB21Q9ULJ3 1066 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 CLIC4Q9Y696 253 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 MAD1L1Q9Y6D9 718 aa9.29□□□□□ -0.92
LCA5-201ENST00000369846 HARSP12081 509 aaKnown RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 PDE1BQ01064 536 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 HP1BP3Q5SSJ5 553 aaPredicted RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 RBM26Q5T8P6 1007 aaKnown RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 KIF2BQ8N4N8 673 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 ICA1LQ8NDH6 482 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 DDX17Q92841 729 aaKnown RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 SCYL1Q96KG9 808 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 CRNKL1Q9BZJ0 848 aaKnown RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 EXOC1LA0A1B0GW35 172 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 ZRANB2O95218 330 aaKnown RBP eCLIP9.28□□□□□ -0.92
LCA5-201ENST00000369846 CYP2E1P05181 493 aaPredicted RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 AP2B1P63010 937 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 RSPH3Q86UC2 560 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 DZIP3Q86Y13 1208 aaKnown RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 FNBP1Q96RU3 617 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 TUBGCP2Q9BSJ2 902 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 ETAA1Q9NY74 926 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 TTLL3Q9Y4R7 772 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 NDUFB9Q9Y6M9 179 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 CFAP69A5D8W1 941 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 EXOC3O60645 756 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 TOM1L1O75674 476 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 HAUS5O94927 633 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 UQCRFS1P1P0C7P4 283 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 DRP2Q13474 957 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 MESDQ14696 234 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 NOD2Q9HC29 1040 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 ARPP21Q9UBL0 812 aaPredicted RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 RNF14Q9UBS8 474 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 ARIH1Q9Y4X5 557 aaPredicted RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 RNF103-CHMP3A0A140T963 221 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 NVLO15381 856 aaKnown RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 MT-ND3P03897 115 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 BCRP11274 1271 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 KRT31Q15323 416 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 KAZNQ674X7 775 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 CYB5D1Q6P9G0 228 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 ANKRD13DQ6ZTN6 518 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 SRRM1Q8IYB3 904 aaKnown RBP9.28□□□□□ -0.92
LCA5-201ENST00000369846 MCUQ8NE86 351 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 SNX29Q8TEQ0 813 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 OMA1Q96E52 524 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 TRIM55Q9BYV6 548 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 TMEM165Q9HC07 324 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 SMYD2Q9NRG4 433 aa9.28□□□□□ -0.92
LCA5-201ENST00000369846 PFKFB2O60825 505 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 TRIM37O94972 964 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 KCNA4P22459 653 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 HSPA2P54652 639 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 BASP1P80723 227 aaKnown RBP9.27□□□□□ -0.92
LCA5-201ENST00000369846 ADCY2Q08462 1091 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 SF3B3Q15393 1217 aaKnown RBP9.27□□□□□ -0.92
LCA5-201ENST00000369846 ARHGAP22Q7Z5H3 698 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 MYLK4Q86YV6 388 aaPredicted RBP9.27□□□□□ -0.92
LCA5-201ENST00000369846 CYFIP2Q96F07 1278 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 ATP6V1G3Q96LB4 118 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 WDR24Q96S15 920 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 SERPINI1Q99574 410 aa9.27□□□□□ -0.92
LCA5-201ENST00000369846 RTL9Q8NET4 1388 aa9.27□□□□□ -0.93
LCA5-201ENST00000369846 SYCE1LA8MT33 242 aa9.27□□□□□ -0.93
LCA5-201ENST00000369846 CCND1P24385 295 aa9.27□□□□□ -0.93
LCA5-201ENST00000369846 TFCP2Q12800 502 aa9.27□□□□□ -0.93
LCA5-201ENST00000369846 CCDC85BQ15834 202 aaPredicted RBP9.27□□□□□ -0.93
LCA5-201ENST00000369846 PACS2Q86VP3 889 aa9.27□□□□□ -0.93
LCA5-201ENST00000369846 GSDMAQ96QA5 445 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms