RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 HOXA13P31271 388 aaPredicted RBP19.57■□□□□ 0.72
UBE3D-203ENST00000369747 TRAF1Q13077 416 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 POSTNQ15063 836 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 PDILTQ8N807 584 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 MB21D1Q8N884 522 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 EPSTI1Q96J88 318 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 TRERF1Q96PN7 1200 aa19.57■□□□□ 0.72
UBE3D-203ENST00000369747 MRPL11Q9Y3B7 192 aaKnown RBP19.57■□□□□ 0.72
UBE3D-203ENST00000369747 A0A087X0B3 334 aa19.56■□□□□ 0.72
UBE3D-203ENST00000369747 CFBP00751 764 aa19.56■□□□□ 0.72
UBE3D-203ENST00000369747 PRR29P0C7W0 189 aa19.56■□□□□ 0.72
UBE3D-203ENST00000369747 CLK2P49760 499 aaKnown RBP19.56■□□□□ 0.72
UBE3D-203ENST00000369747 CCDC186Q7Z3E2 898 aa19.56■□□□□ 0.72
UBE3D-203ENST00000369747 HOOK1Q9UJC3 728 aaKnown RBP19.56■□□□□ 0.72
UBE3D-203ENST00000369747 IKBKBO14920 756 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 AOC2O75106 756 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 Q3C1V9 767 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 NT5DC1Q5TFE4 455 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.55■□□□□ 0.72
UBE3D-203ENST00000369747 SYMPKQ92797 1274 aaKnown RBP19.55■□□□□ 0.72
UBE3D-203ENST00000369747 CAPNS2Q96L46 248 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 SPATC1LQ9H0A9 340 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 R3HDMLQ9H3Y0 253 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 RNF146Q9NTX7 359 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 BMP6P22004 513 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 IFNL1Q8IU54 200 aa19.55■□□□□ 0.72
UBE3D-203ENST00000369747 CCDC194A0A1B0GVG4 234 aa19.54■□□□□ 0.72
UBE3D-203ENST00000369747 SMTNL1A8MU46 457 aa19.54■□□□□ 0.72
UBE3D-203ENST00000369747 MCM7P33993 719 aa19.54■□□□□ 0.72
UBE3D-203ENST00000369747 SARSP49591 514 aaKnown RBP19.54■□□□□ 0.72
UBE3D-203ENST00000369747 INHBEP58166 350 aa19.54■□□□□ 0.72
UBE3D-203ENST00000369747 CCDC144BQ3MJ40 725 aa19.54■□□□□ 0.72
UBE3D-203ENST00000369747 KANK3Q6NY19 840 aa19.54■□□□□ 0.72
UBE3D-203ENST00000369747 GRAMD1CQ8IYS0 662 aa19.54■□□□□ 0.72
UBE3D-203ENST00000369747 PYCARDQ9ULZ3 195 aa19.54■□□□□ 0.72
UBE3D-203ENST00000369747 RABGAP1Q9Y3P9 1069 aa19.54■□□□□ 0.72
UBE3D-203ENST00000369747 VWA3AA6NCI4 1184 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 IL17AQ16552 155 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 ANKRD13CQ8N6S4 541 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 C4orf32Q8N8J7 132 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 PARK7Q99497 189 aaKnown RBP19.53■□□□□ 0.72
UBE3D-203ENST00000369747 MOV10L1Q9BXT6 1211 aaKnown RBP19.53■□□□□ 0.72
UBE3D-203ENST00000369747 HSD3B7Q9H2F3 369 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 MAN1B1Q9UKM7 699 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 PNMA2Q9UL42 364 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 PIK3CDO00329 1044 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 INF2Q27J81 1249 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 RIOX2Q8IUF8 465 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 C17orf53Q8N3J3 647 aaPredicted RBP19.53■□□□□ 0.72
UBE3D-203ENST00000369747 DHX58Q96C10 678 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 GLT8D2Q9H1C3 349 aa19.53■□□□□ 0.72
UBE3D-203ENST00000369747 GCOM1H8Y6P7 765 aaPredicted RBP19.52■□□□□ 0.72
UBE3D-203ENST00000369747 POLR2MP0CAP2 368 aa19.52■□□□□ 0.72
UBE3D-203ENST00000369747 TM4SF4P48230 202 aa19.52■□□□□ 0.72
UBE3D-203ENST00000369747 ERVK-9P63128 1117 aa19.52■□□□□ 0.72
UBE3D-203ENST00000369747 ERVK-24P63145 666 aa19.52■□□□□ 0.72
UBE3D-203ENST00000369747 SREBF2Q12772 1141 aa19.52■□□□□ 0.72
UBE3D-203ENST00000369747 NOGQ13253 232 aa19.52■□□□□ 0.72
UBE3D-203ENST00000369747 FCHSD1Q86WN1 690 aa19.52■□□□□ 0.72
UBE3D-203ENST00000369747 SPATA20Q8TB22 786 aa19.52■□□□□ 0.72
UBE3D-203ENST00000369747 KIAA1524Q8TCG1 905 aa19.52■□□□□ 0.72
UBE3D-203ENST00000369747 HSD17B4P51659 736 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 RPS6P62753 249 aaKnown RBP19.51■□□□□ 0.71
UBE3D-203ENST00000369747 NOLC1Q14978 699 aaKnown RBP eCLIP19.51■□□□□ 0.71
UBE3D-203ENST00000369747 TAF1CQ15572 869 aaPredicted RBP19.51■□□□□ 0.71
UBE3D-203ENST00000369747 NSMFQ6X4W1 530 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 KRT25Q7Z3Z0 450 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 SH3RF1Q7Z6J0 888 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 NCAPG2Q86XI2 1143 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 TBCKQ8TEA7 893 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 SMARCE1Q969G3 411 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 SPTLC3Q9NUV7 552 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 COL20A1Q9P218 1284 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 CENPFP49454 3210 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 SLFN14P0C7P3 912 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 ERCC3P19447 782 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 TPM4P67936 248 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 LRMPQ12912 555 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 MORC3Q14149 939 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 NONOQ15233 471 aaKnown RBP eCLIP19.51■□□□□ 0.71
UBE3D-203ENST00000369747 ARL6IP4Q66PJ3 421 aaKnown RBP19.51■□□□□ 0.71
UBE3D-203ENST00000369747 SLC30A10Q6XR72 485 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 MCF2L2Q86YR7 1114 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 NAP1L5Q96NT1 182 aaPredicted RBP19.51■□□□□ 0.71
UBE3D-203ENST00000369747 ACAD9Q9H845 621 aa19.51■□□□□ 0.71
UBE3D-203ENST00000369747 GCLCP48506 637 aaPredicted RBP19.5■□□□□ 0.71
UBE3D-203ENST00000369747 MYL5Q02045 173 aa19.5■□□□□ 0.71
UBE3D-203ENST00000369747 GPRC5AQ8NFJ5 357 aa19.5■□□□□ 0.71
UBE3D-203ENST00000369747 PURBQ96QR8 312 aaKnown RBP19.5■□□□□ 0.71
UBE3D-203ENST00000369747 ANO3Q9BYT9 981 aa19.5■□□□□ 0.71
UBE3D-203ENST00000369747 PORCNQ9H237 461 aa19.5■□□□□ 0.71
UBE3D-203ENST00000369747 ZCCHC17Q9NP64 241 aaKnown RBP19.5■□□□□ 0.71
UBE3D-203ENST00000369747 SPDYE3A6NKU9 549 aa19.49■□□□□ 0.71
UBE3D-203ENST00000369747 EDIL3O43854 480 aa19.49■□□□□ 0.71
UBE3D-203ENST00000369747 BAATQ14032 418 aaPredicted RBP19.49■□□□□ 0.71
UBE3D-203ENST00000369747 TKFCQ3LXA3 575 aa19.49■□□□□ 0.71
UBE3D-203ENST00000369747 RNF207Q6ZRF8 634 aa19.49■□□□□ 0.71
UBE3D-203ENST00000369747 TRIML1Q8N9V2 468 aa19.49■□□□□ 0.71
UBE3D-203ENST00000369747 GTF3C2Q8WUA4 911 aaPredicted RBP19.49■□□□□ 0.71
UBE3D-203ENST00000369747 CACTINQ8WUQ7 758 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms