RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 FIGNQ5HY92 759 aa15.86■□□□□ 0.13
PHTF1-204ENST00000369604 RUFY4Q6ZNE9 571 aa15.86■□□□□ 0.13
PHTF1-204ENST00000369604 FAM228AQ86W67 206 aa15.86■□□□□ 0.13
PHTF1-204ENST00000369604 DDX42Q86XP3 938 aaKnown RBP eCLIP15.86■□□□□ 0.13
PHTF1-204ENST00000369604 MREGQ8N565 214 aa15.86■□□□□ 0.13
PHTF1-204ENST00000369604 RSRC1Q96IZ7 334 aaKnown RBP15.86■□□□□ 0.13
PHTF1-204ENST00000369604 MTA3Q9BTC8 594 aa15.86■□□□□ 0.13
PHTF1-204ENST00000369604 MTMR7Q9Y216 660 aa15.86■□□□□ 0.13
PHTF1-204ENST00000369604 BUB1BO60566 1050 aaPredicted RBP15.85■□□□□ 0.13
PHTF1-204ENST00000369604 CALM1P0DP23 149 aa15.85■□□□□ 0.13
PHTF1-204ENST00000369604 CALM2P0DP24 149 aa15.85■□□□□ 0.13
PHTF1-204ENST00000369604 CALM3P0DP25 149 aa15.85■□□□□ 0.13
PHTF1-204ENST00000369604 PNMA8AQ86V59 439 aaPredicted RBP15.85■□□□□ 0.13
PHTF1-204ENST00000369604 GPKOWQ92917 476 aaPredicted RBP eCLIP15.85■□□□□ 0.13
PHTF1-204ENST00000369604 LUC7LQ9NQ29 371 aaKnown RBP15.85■□□□□ 0.13
PHTF1-204ENST00000369604 USP54Q70EL1 1684 aa15.85■□□□□ 0.13
PHTF1-204ENST00000369604 MYH7P12883 1935 aa15.85■□□□□ 0.13
PHTF1-204ENST00000369604 NAIF1Q69YI7 327 aaPredicted RBP15.85■□□□□ 0.13
PHTF1-204ENST00000369604 LRRC45Q96CN5 670 aa15.85■□□□□ 0.13
PHTF1-204ENST00000369604 TAF1DQ9H5J8 278 aaPredicted RBP15.85■□□□□ 0.13
PHTF1-204ENST00000369604 TRAPPC3O43617 180 aa15.85■□□□□ 0.13
PHTF1-204ENST00000369604 TROAPQ12815 778 aa15.85■□□□□ 0.13
PHTF1-204ENST00000369604 CCDC84Q86UT8 332 aaPredicted RBP15.85■□□□□ 0.13
PHTF1-204ENST00000369604 TMEM60Q9H2L4 133 aa15.85■□□□□ 0.13
PHTF1-204ENST00000369604 PPP1R12AO14974 1030 aaPredicted RBP15.84■□□□□ 0.13
PHTF1-204ENST00000369604 MRPL12P52815 198 aaKnown RBP15.84■□□□□ 0.13
PHTF1-204ENST00000369604 IFFO1Q0D2I5 559 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 BLIDQ8IZY5 108 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 VGLL2Q8N8G2 317 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 TCP11Q8WWU5 503 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 RAPGEF5Q92565 580 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 TCP11L1Q9NUJ3 509 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 KCNK3O14649 394 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 CLTAP09496 248 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 PLCG1P19174 1290 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 CALRP27797 417 aaKnown RBP15.84■□□□□ 0.13
PHTF1-204ENST00000369604 BCAMP50895 628 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 PPP2R2AP63151 447 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 KRT71Q3SY84 523 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 EMC10Q5UCC4 262 aa15.84■□□□□ 0.13
PHTF1-204ENST00000369604 RNF10Q8N5U6 811 aaKnown RBP15.84■□□□□ 0.13
PHTF1-204ENST00000369604 NMT2O60551 498 aa15.83■□□□□ 0.13
PHTF1-204ENST00000369604 HSPA9P38646 679 aaKnown RBP15.83■□□□□ 0.13
PHTF1-204ENST00000369604 MAGOHP61326 146 aaKnown RBP15.83■□□□□ 0.13
PHTF1-204ENST00000369604 INF2Q27J81 1249 aa15.83■□□□□ 0.13
PHTF1-204ENST00000369604 MAGOHBQ96A72 148 aaKnown RBP15.83■□□□□ 0.13
PHTF1-204ENST00000369604 PLCB1Q9NQ66 1216 aa15.83■□□□□ 0.13
PHTF1-204ENST00000369604 CEP104O60308 925 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 CALML3P27482 149 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 SLC9C1Q4G0N8 1177 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 CABP7Q86V35 215 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 IQCDQ96DY2 449 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 THOC1Q96FV9 657 aaKnown RBP15.83■□□□□ 0.12
PHTF1-204ENST00000369604 FAXDC2Q96IV6 333 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 PLA2G12BQ9BX93 195 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 KBTBD4Q9NVX7 518 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 CNTNAP5Q8WYK1 1306 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 MAGEB6P1A0A0J9YX57 407 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 HNRNPH3P31942 346 aaKnown RBP15.83■□□□□ 0.12
PHTF1-204ENST00000369604 MYO1EQ12965 1108 aa15.83■□□□□ 0.12
PHTF1-204ENST00000369604 ZSCAN29Q8IWY8 852 aaPredicted RBP15.83■□□□□ 0.12
PHTF1-204ENST00000369604 MYL1P05976 194 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 ERVK-9P63128 1117 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 ZNF844Q08AG5 666 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 KIAA0753Q2KHM9 967 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 FAM47AQ5JRC9 791 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 CARD10Q9BWT7 1032 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 AP1M1Q9BXS5 423 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 ATP6V0A4Q9HBG4 840 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 FBXL5Q9UKA1 691 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 MYH6P13533 1939 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 GCKP35557 465 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 ACCSLQ4AC99 568 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 C4orf32Q8N8J7 132 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 TRIM9Q9C026 710 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 NOD2Q9HC29 1040 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 SIK3Q9Y2K2 1263 aa15.82■□□□□ 0.12
PHTF1-204ENST00000369604 SCN11AQ9UI33 1791 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 PJA2O43164 708 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 KLRC1P26715 233 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 BIRC3Q13489 604 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 HLFQ16534 295 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 MAN2A1Q16706 1144 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 CNNM4Q6P4Q7 775 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 LRIG3Q6UXM1 1119 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 TBC1D5Q92609 795 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 CNOT8Q9UFF9 292 aaKnown RBP15.81■□□□□ 0.12
PHTF1-204ENST00000369604 FAM205AQ6ZU69 1335 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 PNPLA7Q6ZV29 1317 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 SRRM3A6NNA2 597 aaPredicted RBP15.81■□□□□ 0.12
PHTF1-204ENST00000369604 ATF3P18847 181 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 TRIM28Q13263 835 aaKnown RBP15.81■□□□□ 0.12
PHTF1-204ENST00000369604 RPS6KA1Q15418 735 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 MDM1Q8TC05 714 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 SEMA6BQ9H3T3 888 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 SLC12A6Q9UHW9 1150 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 DISP2A7MBM2 1401 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 AKAP11Q9UKA4 1901 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 GRID2IPA4D2P6 1211 aa15.81■□□□□ 0.12
PHTF1-204ENST00000369604 LCA5LO95447 670 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms