RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 RAB34Q9BZG1 259 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 CUEDC2Q9H467 287 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 PCDHA1Q9Y5I3 950 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
RAB39B-201ENST00000369454 MEIS1O00470 390 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 PHACTR2O75167 634 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 MYL1P05976 194 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 VSNL1P62760 191 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 RRAGAQ7L523 313 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 CAGE1Q8TC20 777 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 ZFP91Q96JP5 570 aaPredicted RBP12.81□□□□□ -0.36
RAB39B-201ENST00000369454 ABCB6Q9NP58 842 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 MYH1P12882 1939 aa12.81□□□□□ -0.36
RAB39B-201ENST00000369454 A0A1W2PQC6 194 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 POTEB3A0JP26 581 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 POTECB2RU33 542 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 TRAF5O00463 557 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 KRT18P05783 430 aaKnown RBP12.8□□□□□ -0.36
RAB39B-201ENST00000369454 MMP10P09238 476 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 EEF2P13639 858 aaKnown RBP12.8□□□□□ -0.36
RAB39B-201ENST00000369454 HOXA10P31260 410 aaPredicted RBP12.8□□□□□ -0.36
RAB39B-201ENST00000369454 HSPA1LP34931 641 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 APOBEC3HQ6NTF7 200 aaKnown RBP12.8□□□□□ -0.36
RAB39B-201ENST00000369454 POTEBQ6S5H4 581 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 FAM114A1Q8IWE2 563 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 RAD54LQ92698 747 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 NDST4Q9H3R1 872 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 FAM53CQ9NYF3 392 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 CYLC1P35663 651 aaPredicted RBP12.8□□□□□ -0.36
RAB39B-201ENST00000369454 CRKP46108 304 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 SEPT2Q15019 361 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 QRICH1Q2TAL8 776 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 HAS1Q92839 578 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 TRPC5Q9UL62 973 aaPredicted RBP12.8□□□□□ -0.36
RAB39B-201ENST00000369454 MATR3P43243 847 aaKnown RBP eCLIP12.8□□□□□ -0.36
RAB39B-201ENST00000369454 MRPL12P52815 198 aaKnown RBP12.8□□□□□ -0.36
RAB39B-201ENST00000369454 UNC13DQ70J99 1090 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 FUT8Q9BYC5 575 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 DNAJC18Q9H819 358 aa12.8□□□□□ -0.36
RAB39B-201ENST00000369454 ZBTB5O15062 677 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 FECHP22830 423 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 NAP1L1P55209 391 aaKnown RBP12.79□□□□□ -0.36
RAB39B-201ENST00000369454 CCDC40Q4G0X9 1142 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 MMS19Q96T76 1030 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 KRT86O43790 486 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 AKR1B10O60218 316 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 CXCR5P32302 372 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 ZBED6P86452 979 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 VWA3BQ502W6 1294 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 PRR16Q569H4 304 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 TDRD12Q587J7 1177 aaKnown RBP12.79□□□□□ -0.36
RAB39B-201ENST00000369454 CACNA2D4Q7Z3S7 1137 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
RAB39B-201ENST00000369454 HAUS4Q9H6D7 363 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 MLXIPQ9HAP2 919 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 RIC8AQ9NPQ8 531 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 HOXA13P31271 388 aaPredicted RBP12.79□□□□□ -0.36
RAB39B-201ENST00000369454 KRT83P78385 493 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 SPA17Q15506 151 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 CERKLQ49MI3 558 aaPredicted RBP12.79□□□□□ -0.36
RAB39B-201ENST00000369454 HERC4Q5GLZ8 1057 aaPredicted RBP12.79□□□□□ -0.36
RAB39B-201ENST00000369454 KRT27Q7Z3Y8 459 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 NEK11Q8NG66 645 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 NOC3LQ8WTT2 800 aaKnown RBP12.79□□□□□ -0.36
RAB39B-201ENST00000369454 PDE11AQ9HCR9 933 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 PANK4Q9NVE7 773 aa12.79□□□□□ -0.36
RAB39B-201ENST00000369454 TAF1LQ8IZX4 1826 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 ESYT2A0FGR8 921 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 POTEFA5A3E0 1075 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 LRRC53A6NM62 1247 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 ZNF263O14978 683 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 N4BP1O75113 896 aaKnown RBP12.78□□□□□ -0.36
RAB39B-201ENST00000369454 POTEIP0CG38 1075 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 FXR2P51116 673 aaKnown RBP eCLIP12.78□□□□□ -0.36
RAB39B-201ENST00000369454 CYP4A11Q02928 519 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 SLFN13Q68D06 897 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 CENPPQ6IPU0 288 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 POTEEQ6S8J3 1075 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 GSPT2Q8IYD1 628 aaKnown RBP12.78□□□□□ -0.36
RAB39B-201ENST00000369454 TTYH3Q9C0H2 523 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 PLEKHA4Q9H4M7 779 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 MAGEF1Q9HAY2 307 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 SMARCAL1Q9NZC9 954 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 SAR1BQ9Y6B6 198 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 EIF4A3P38919 411 aaKnown RBP12.78□□□□□ -0.36
RAB39B-201ENST00000369454 KIF5AQ12840 1032 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 COASYQ13057 564 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 TMC4Q7Z404 712 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 SNHG28P0DPA3 235 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 CDC37Q16543 378 aaPredicted RBP12.78□□□□□ -0.36
RAB39B-201ENST00000369454 GPBP1Q86WP2 473 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 TDRD3Q9H7E2 651 aaKnown RBP12.78□□□□□ -0.36
RAB39B-201ENST00000369454 ARHGAP20Q9P2F6 1191 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 STK17AQ9UEE5 414 aa12.78□□□□□ -0.36
RAB39B-201ENST00000369454 NHSQ6T4R5 1651 aa12.77□□□□□ -0.36
RAB39B-201ENST00000369454 CCDC151A5D8V7 595 aa12.77□□□□□ -0.36
RAB39B-201ENST00000369454 H3BQF6 201 aa12.77□□□□□ -0.36
RAB39B-201ENST00000369454 MOCS3O95396 460 aa12.77□□□□□ -0.36
RAB39B-201ENST00000369454 TNNT3P45378 269 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms