RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 A0A1W2PQY0 241 aa25.79■■□□□ 1.72
ECHDC1-203ENST00000368291 TXNP10599 105 aaKnown RBP25.79■■□□□ 1.72
ECHDC1-203ENST00000368291 CCND2P30279 289 aa25.79■■□□□ 1.72
ECHDC1-203ENST00000368291 RBM25P49756 843 aaKnown RBP25.79■■□□□ 1.72
ECHDC1-203ENST00000368291 MRPS9P82933 396 aaKnown RBP25.79■■□□□ 1.72
ECHDC1-203ENST00000368291 ANKRD1Q15327 319 aa25.79■■□□□ 1.72
ECHDC1-203ENST00000368291 SLC39A5Q6ZMH5 540 aa25.79■■□□□ 1.72
ECHDC1-203ENST00000368291 C22orf23Q9BZE7 217 aa25.79■■□□□ 1.72
ECHDC1-203ENST00000368291 RBM27Q9P2N5 1060 aaKnown RBP25.79■■□□□ 1.72
ECHDC1-203ENST00000368291 MOXD2PA6NHM9 499 aa25.78■■□□□ 1.72
ECHDC1-203ENST00000368291 NKRFO15226 690 aaKnown RBP eCLIP25.78■■□□□ 1.72
ECHDC1-203ENST00000368291 EVI5O60447 810 aa25.78■■□□□ 1.72
ECHDC1-203ENST00000368291 PFKFB2O60825 505 aa25.78■■□□□ 1.72
ECHDC1-203ENST00000368291 ASGR1P07306 291 aa25.78■■□□□ 1.72
ECHDC1-203ENST00000368291 TTLL4Q14679 1199 aa25.78■■□□□ 1.72
ECHDC1-203ENST00000368291 SNX17Q15036 470 aa25.78■■□□□ 1.72
ECHDC1-203ENST00000368291 AP5M1Q9H0R1 490 aa25.78■■□□□ 1.72
ECHDC1-203ENST00000368291 CEP290O15078 2479 aa25.78■■□□□ 1.72
ECHDC1-203ENST00000368291 SMCO2A6NFE2 343 aa25.77■■□□□ 1.72
ECHDC1-203ENST00000368291 ADAMTS3O15072 1205 aa25.77■■□□□ 1.72
ECHDC1-203ENST00000368291 LARGE1O95461 756 aa25.77■■□□□ 1.72
ECHDC1-203ENST00000368291 FSCN1Q16658 493 aaKnown RBP25.77■■□□□ 1.72
ECHDC1-203ENST00000368291 LY6KQ17RY6 165 aa25.77■■□□□ 1.72
ECHDC1-203ENST00000368291 PCSK9Q8NBP7 692 aaKnown RBP25.77■■□□□ 1.72
ECHDC1-203ENST00000368291 SLKQ9H2G2 1235 aaPredicted RBP25.77■■□□□ 1.72
ECHDC1-203ENST00000368291 CLK2P49760 499 aaKnown RBP25.76■■□□□ 1.71
ECHDC1-203ENST00000368291 ADCY7P51828 1080 aa25.76■■□□□ 1.71
ECHDC1-203ENST00000368291 ME3Q16798 604 aa25.76■■□□□ 1.71
ECHDC1-203ENST00000368291 PRPF38BQ5VTL8 546 aaKnown RBP25.76■■□□□ 1.71
ECHDC1-203ENST00000368291 DDX41Q9UJV9 622 aaKnown RBP25.76■■□□□ 1.71
ECHDC1-203ENST00000368291 PCDHA6Q9UN73 950 aa25.76■■□□□ 1.71
ECHDC1-203ENST00000368291 PCDHA8Q9Y5H6 950 aa25.76■■□□□ 1.71
ECHDC1-203ENST00000368291 ESYT2A0FGR8 921 aa25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 CPLX1O14810 134 aa25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 AKAP17AQ02040 695 aaKnown RBP25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 C1orf53Q5VUE5 145 aa25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 PCNX4Q63HM2 1172 aa25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 TEX2Q8IWB9 1127 aa25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 C7orf61Q8IZ16 206 aa25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 OR6J1Q8NGC5 347 aa25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 INPP4AQ96PE3 977 aaPredicted RBP25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 ZMYND12Q9H0C1 365 aa25.75■■□□□ 1.71
ECHDC1-203ENST00000368291 H0YGN5 161 aa25.74■■□□□ 1.71
ECHDC1-203ENST00000368291 RTP1P59025 263 aa25.74■■□□□ 1.71
ECHDC1-203ENST00000368291 ARHGAP1Q07960 439 aa25.74■■□□□ 1.71
ECHDC1-203ENST00000368291 SSRP1Q08945 709 aaKnown RBP25.74■■□□□ 1.71
ECHDC1-203ENST00000368291 NR2E3Q9Y5X4 410 aa25.74■■□□□ 1.71
ECHDC1-203ENST00000368291 SCN10AQ9Y5Y9 1956 aa25.74■■□□□ 1.71
ECHDC1-203ENST00000368291 DTNBO60941 627 aa25.73■■□□□ 1.71
ECHDC1-203ENST00000368291 CTDNEP1O95476 244 aa25.73■■□□□ 1.71
ECHDC1-203ENST00000368291 CXCL17Q6UXB2 119 aa25.73■■□□□ 1.71
ECHDC1-203ENST00000368291 STARD7Q9NQZ5 370 aa25.73■■□□□ 1.71
ECHDC1-203ENST00000368291 TMEM260Q9NX78 707 aa25.73■■□□□ 1.71
ECHDC1-203ENST00000368291 RTEL1Q9NZ71 1219 aa25.73■■□□□ 1.71
ECHDC1-203ENST00000368291 MRVI1Q9Y6F6 885 aa25.73■■□□□ 1.71
ECHDC1-203ENST00000368291 ELP1O95163 1332 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 SPDYE3A6NKU9 549 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 STAM2O75886 525 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 SP2Q02086 613 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 SEMA3FQ13275 785 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 XRRA1Q6P2D8 792 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 TRIM22Q8IYM9 498 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 NECAB1Q8N987 351 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 PGBD1Q96JS3 809 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 VPS54Q9P1Q0 977 aa25.72■■□□□ 1.71
ECHDC1-203ENST00000368291 A6NJR5 290 aa25.71■■□□□ 1.71
ECHDC1-203ENST00000368291 DEXIO95424 95 aa25.71■■□□□ 1.71
ECHDC1-203ENST00000368291 GH1P01241 217 aa25.71■■□□□ 1.71
ECHDC1-203ENST00000368291 ICAM3P32942 547 aa25.71■■□□□ 1.71
ECHDC1-203ENST00000368291 TRIM60Q495X7 471 aa25.71■■□□□ 1.71
ECHDC1-203ENST00000368291 CPLX2Q6PUV4 134 aaKnown RBP25.71■■□□□ 1.71
ECHDC1-203ENST00000368291 GLT1D1Q96MS3 346 aa25.71■■□□□ 1.71
ECHDC1-203ENST00000368291 AIFM3Q96NN9 605 aa25.71■■□□□ 1.71
ECHDC1-203ENST00000368291 GLT8D2Q9H1C3 349 aa25.71■■□□□ 1.71
ECHDC1-203ENST00000368291 TGFB3P10600 412 aa25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 CPT1AP50416 773 aa25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 ST3GAL1Q11201 340 aa25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 KCNV1Q6PIU1 500 aa25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 CCDC12Q8WUD4 166 aaPredicted RBP25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 GTF3C6Q969F1 213 aa25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 ANO3Q9BYT9 981 aa25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 SH3GLB2Q9NR46 395 aa25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 PCDH10Q9P2E7 1040 aa25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 ATP11BQ9Y2G3 1177 aa25.7■■□□□ 1.71
ECHDC1-203ENST00000368291 SPATA31C2B4DYI2 1134 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 ZEB2O60315 1214 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 FOSP01100 380 aaPredicted RBP25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 UBA1P22314 1058 aaKnown RBP25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 CDK7P50613 346 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 PURAQ00577 322 aaKnown RBP25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 AP3B2Q13367 1082 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 AFG1LQ8WV93 481 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 EMID1Q96A84 441 aaPredicted RBP25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 BCAS3Q9H6U6 928 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 GRIN2DO15399 1336 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 LTBP2Q14767 1821 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 GNPTABQ3T906 1256 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 MYSM1Q5VVJ2 828 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 JAKMIP3Q5VZ66 844 aa25.69■■□□□ 1.7
ECHDC1-203ENST00000368291 C6orf50Q9HD87 102 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms