RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ADCY1Q08828 1119 aa14.09□□□□□ -0.15
PTPRK-207ENST00000368226 NXNQ6DKJ4 435 aa14.09□□□□□ -0.15
PTPRK-207ENST00000368226 TRIM58Q8NG06 486 aa14.09□□□□□ -0.15
PTPRK-207ENST00000368226 FAM49AQ9H0Q0 323 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-207ENST00000368226 TUBBP07437 444 aa14.08□□□□□ -0.15
PTPRK-207ENST00000368226 SLC10A4Q96EP9 437 aa14.08□□□□□ -0.15
PTPRK-207ENST00000368226 NLRP4Q96MN2 994 aa14.08□□□□□ -0.15
PTPRK-207ENST00000368226 SIRT2Q8IXJ6 389 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 CCDC13Q8IYE1 715 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 RYBPQ8N488 228 aaPredicted RBP14.08□□□□□ -0.16
PTPRK-207ENST00000368226 RAB17Q9H0T7 212 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 KIF23Q02241 960 aaPredicted RBP14.08□□□□□ -0.16
PTPRK-207ENST00000368226 FAM83BQ5T0W9 1011 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 RETREG2Q8NC44 543 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 ZNF148Q9UQR1 794 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 ZCCHC11Q5TAX3 1644 aaKnown RBP14.08□□□□□ -0.16
PTPRK-207ENST00000368226 CRKP46108 304 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 RBL2Q08999 1139 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 SLC39A14Q15043 492 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 LGSNQ5TDP6 509 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 SLC44A5Q8NCS7 719 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 MCUR1Q96AQ8 359 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 SMYD2Q9NRG4 433 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 HYOU1Q9Y4L1 999 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 TACC3Q9Y6A5 838 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 H0YCG3 227 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 ZBTB24O43167 697 aaPredicted RBP14.08□□□□□ -0.16
PTPRK-207ENST00000368226 ATP1A2P50993 1020 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 BFSP1Q12934 665 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 RSRC2Q7L4I2 434 aaKnown RBP14.08□□□□□ -0.16
PTPRK-207ENST00000368226 FAM186BQ8IYM0 893 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 NT5C1BQ96P26 610 aa14.08□□□□□ -0.16
PTPRK-207ENST00000368226 SETD1BQ9UPS6 1966 aaKnown RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 A6NJR5 290 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 USP17L5A8MUK1 530 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 MYL3P08590 195 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 PCP11498 1178 aaKnown RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 IREB2P48200 963 aaKnown RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 TTC31Q49AM3 519 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 TTC19Q6DKK2 380 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 ADD3Q9UEY8 706 aaKnown RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 ECE2O60344 883 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 TMCO4Q5TGY1 634 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 CELF1Q92879 486 aaKnown RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 NEDD4P46934 1319 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 RGS16O15492 202 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 GTF2A1P52655 376 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 MFAP3P55082 362 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 PTK2Q05397 1052 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 TUBB2AQ13885 445 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 RUFY4Q6ZNE9 571 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 LRRC8AQ8IWT6 810 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 AFAP1L2Q8N4X5 818 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 FAM133AQ8N9E0 248 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 ZNF668Q96K58 619 aaPredicted RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 TUBB2BQ9BVA1 445 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 RAVER2Q9HCJ3 691 aaKnown RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 RIPOR2Q9Y4F9 1068 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 CCDC62Q6P9F0 684 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 RIC8AQ9NPQ8 531 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 MAN1B1Q9UKM7 699 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 GFPT2O94808 682 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 PLCG1P19174 1290 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 PSMC2P35998 433 aaKnown RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 ATP11AP98196 1134 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 ERCC6LQ2NKX8 1250 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 MAIP1Q8WWC4 291 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 ACCSQ96QU6 501 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 SNX25Q9H3E2 840 aa14.07□□□□□ -0.16
PTPRK-207ENST00000368226 METTL14Q9HCE5 456 aaKnown RBP14.07□□□□□ -0.16
PTPRK-207ENST00000368226 RNF123Q5XPI4 1314 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 H2AFZP0C0S5 128 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 H2AFVQ71UI9 128 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 PIGOQ8TEQ8 1089 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 CCDC51Q96ER9 411 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 PIM2Q9P1W9 311 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 MKRN1Q9UHC7 482 aaKnown RBP14.06□□□□□ -0.16
PTPRK-207ENST00000368226 SGK1O00141 431 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 RNF8O76064 485 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 SRGAP1Q7Z6B7 1085 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 DHX36Q9H2U1 1008 aaKnown RBP14.06□□□□□ -0.16
PTPRK-207ENST00000368226 HAUS2Q9NVX0 235 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 HECW2Q9P2P5 1572 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 STX2P32856 288 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 PDXDC2PQ6P474 469 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 PRDM15P57071 1507 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-207ENST00000368226 SPATA31A3Q5VYP0 1347 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 ZMYND10O75800 440 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 ABCA8O94911 1581 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 ZSCAN20P17040 1043 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-207ENST00000368226 RPUSD2Q8IZ73 545 aaKnown RBP14.06□□□□□ -0.16
PTPRK-207ENST00000368226 P2RX5Q93086 422 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 UBE2TQ9NPD8 197 aaPredicted RBP14.06□□□□□ -0.16
PTPRK-207ENST00000368226 CXCR5P32302 372 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 RSPH3Q86UC2 560 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 COA1Q9GZY4 146 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 STK38LQ9Y2H1 464 aa14.06□□□□□ -0.16
PTPRK-207ENST00000368226 AFPP02771 609 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms