RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RHPN1Q8TCX5 695 aa17.44■□□□□ 0.38
VAMP4-202ENST00000367740 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
VAMP4-202ENST00000367740 CCPG1Q9ULG6 757 aa17.44■□□□□ 0.38
VAMP4-202ENST00000367740 RIF1Q5UIP0 2472 aaKnown RBP17.44■□□□□ 0.38
VAMP4-202ENST00000367740 FAM186AA6NE01 2351 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 MINDY4BA8MYZ0 360 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 PLA2G6O60733 806 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 TBX10O75333 385 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 AMHP03971 560 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 ZXDAP98168 799 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 HYAL1Q12794 435 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 TRIM71Q2Q1W2 868 aaKnown RBP17.43■□□□□ 0.38
VAMP4-202ENST00000367740 CEP85Q6P2H3 762 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 RASGRP2Q7LDG7 609 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 ERMP1Q7Z2K6 904 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 TMEM192Q8IY95 271 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 SCFD2Q8WU76 684 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 KAT2BQ92831 832 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 ATOH1Q92858 354 aaPredicted RBP17.43■□□□□ 0.38
VAMP4-202ENST00000367740 WNT8BQ93098 351 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 GTF2IRD1Q9UHL9 959 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 PRR12Q9ULL5 1215 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 DMXL1Q9Y485 3027 aa17.43■□□□□ 0.38
VAMP4-202ENST00000367740 WDR87Q6ZQQ6 2873 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 GSG1L2A8MUP6 293 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 NFIBO00712 420 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 NCK2O43639 380 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 LGR5O75473 907 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 ARIH2O95376 493 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 SLC1A4P43007 532 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 ZNF618Q5T7W0 954 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 SLC30A10Q6XR72 485 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 KCTD1Q719H9 257 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 ASCL5Q7RTU5 278 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 BOLA2Q9H3K6 86 aa17.42■□□□□ 0.38
VAMP4-202ENST00000367740 KIAA1217Q5T5P2 1943 aa17.41■□□□□ 0.38
VAMP4-202ENST00000367740 PROB1E7EW31 1015 aa17.41■□□□□ 0.38
VAMP4-202ENST00000367740 ICAM1P05362 532 aa17.41■□□□□ 0.38
VAMP4-202ENST00000367740 MMP3P08254 477 aa17.41■□□□□ 0.38
VAMP4-202ENST00000367740 TXNP10599 105 aaKnown RBP17.41■□□□□ 0.38
VAMP4-202ENST00000367740 MCCP23508 829 aa17.41■□□□□ 0.38
VAMP4-202ENST00000367740 EDNRBP24530 442 aa17.41■□□□□ 0.38
VAMP4-202ENST00000367740 ZNF444Q8N0Y2 327 aaPredicted RBP17.41■□□□□ 0.38
VAMP4-202ENST00000367740 STRBPQ96SI9 672 aaKnown RBP17.41■□□□□ 0.38
VAMP4-202ENST00000367740 YME1L1Q96TA2 773 aa17.41■□□□□ 0.38
VAMP4-202ENST00000367740 PTPDC1A2A3K4 754 aa17.4■□□□□ 0.38
VAMP4-202ENST00000367740 PDE4DQ08499 809 aa17.4■□□□□ 0.38
VAMP4-202ENST00000367740 GIMAP6Q6P9H5 292 aa17.4■□□□□ 0.38
VAMP4-202ENST00000367740 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
VAMP4-202ENST00000367740 DBF4BQ8NFT6 615 aa17.4■□□□□ 0.38
VAMP4-202ENST00000367740 AFG1LQ8WV93 481 aa17.4■□□□□ 0.38
VAMP4-202ENST00000367740 IRF2BPLQ9H1B7 796 aa17.4■□□□□ 0.38
VAMP4-202ENST00000367740 EPB41L4AQ9HCS5 686 aaPredicted RBP17.4■□□□□ 0.38
VAMP4-202ENST00000367740 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
VAMP4-202ENST00000367740 CD207Q9UJ71 328 aa17.4■□□□□ 0.38
VAMP4-202ENST00000367740 H0Y858 1186 aa17.39■□□□□ 0.37
VAMP4-202ENST00000367740 LINC01565O15544 149 aa17.39■□□□□ 0.37
VAMP4-202ENST00000367740 IFIT2P09913 472 aaKnown RBP17.39■□□□□ 0.37
VAMP4-202ENST00000367740 GTF2F1P35269 517 aaKnown RBP eCLIP17.39■□□□□ 0.37
VAMP4-202ENST00000367740 PDE4BQ07343 736 aa17.39■□□□□ 0.37
VAMP4-202ENST00000367740 PTK7Q13308 1070 aa17.39■□□□□ 0.37
VAMP4-202ENST00000367740 NEDD1Q8NHV4 660 aa17.39■□□□□ 0.37
VAMP4-202ENST00000367740 ASIC4Q96FT7 647 aa17.39■□□□□ 0.37
VAMP4-202ENST00000367740 HAUS7Q99871 368 aa17.39■□□□□ 0.37
VAMP4-202ENST00000367740 RANBP17Q9H2T7 1088 aaKnown RBP17.39■□□□□ 0.37
VAMP4-202ENST00000367740 TLR9Q9NR96 1032 aa17.39■□□□□ 0.37
VAMP4-202ENST00000367740 GVINP1Q7Z2Y8 2422 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 PRR23AA6NEV1 266 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 LOC730098B7Z3J9 87 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 TSPY3P0CV98 308 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 TSPY8P0CW00 308 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 CALML3P27482 149 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 AVPR2P30518 371 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 SIGLEC14Q08ET2 396 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 RCSD1Q6JBY9 416 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 FSD1Q9BTV5 496 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 ZNF287Q9HBT7 754 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 EMSYQ7Z589 1322 aa17.38■□□□□ 0.37
VAMP4-202ENST00000367740 ATP5JP18859 108 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 ARHGAP1Q07960 439 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 CBX2Q14781 532 aaPredicted RBP17.37■□□□□ 0.37
VAMP4-202ENST00000367740 PLEKHG4Q58EX7 1191 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 HSP90AB4PQ58FF6 505 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 CCDC62Q6P9F0 684 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 C7orf31Q8N865 590 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 TOP1MTQ969P6 601 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 MSLNLQ96KJ4 702 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 CACNA1BQ00975 2339 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 ZFHX4Q86UP3 3567 aa17.37■□□□□ 0.37
VAMP4-202ENST00000367740 KIAA1671Q9BY89 1806 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 C5orf67F2Z3F1 127 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 GRM6O15303 877 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 EYA4O95677 639 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 LINC00271P0C7V0 271 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 CTNNB1P35222 781 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 ZSCAN25Q6NSZ9 544 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 ITPRIPQ8IWB1 547 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 CLEC4DQ8WXI8 215 aa17.36■□□□□ 0.37
VAMP4-202ENST00000367740 KIF1BPQ96EK5 621 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms