RNA–Protein interactions for RNA: ENST00000366740.5

MRPL55-213, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-213ENST00000366740 IL25Q9H293 177 aa13.68□□□□□ -0.22
MRPL55-213ENST00000366740 BAZ2BQ9UIF8 2168 aaKnown RBP13.68□□□□□ -0.22
MRPL55-213ENST00000366740 CCDC171Q6TFL3 1326 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 B4DLN1 442 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 MMP3P08254 477 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 MRPL12P52815 198 aaKnown RBP13.67□□□□□ -0.22
MRPL55-213ENST00000366740 CCDC62Q6P9F0 684 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 SKAP1Q86WV1 359 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 RGS22Q8NE09 1264 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 TTC14Q96N46 770 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 LRFN3Q9BTN0 628 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 EPHX3Q9H6B9 360 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 LMCD1Q9NZU5 365 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 NOD1Q9Y239 953 aa13.67□□□□□ -0.22
MRPL55-213ENST00000366740 LCHNA4D1U4 455 aa13.66□□□□□ -0.22
MRPL55-213ENST00000366740 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
MRPL55-213ENST00000366740 CXCL10P02778 98 aa13.66□□□□□ -0.22
MRPL55-213ENST00000366740 KCNJ6P48051 423 aa13.66□□□□□ -0.22
MRPL55-213ENST00000366740 PTGISQ16647 500 aa13.66□□□□□ -0.22
MRPL55-213ENST00000366740 GDF6Q6KF10 455 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-213ENST00000366740 CNKSR3Q6P9H4 555 aa13.66□□□□□ -0.22
MRPL55-213ENST00000366740 DHX38Q92620 1227 aaKnown RBP13.66□□□□□ -0.22
MRPL55-213ENST00000366740 KAT2BQ92831 832 aa13.66□□□□□ -0.22
MRPL55-213ENST00000366740 C11orf16Q9NQ32 467 aa13.66□□□□□ -0.22
MRPL55-213ENST00000366740 TOMM22Q9NS69 142 aa13.66□□□□□ -0.22
MRPL55-213ENST00000366740 PCP11498 1178 aaKnown RBP13.65□□□□□ -0.22
MRPL55-213ENST00000366740 SELPP16109 830 aa13.65□□□□□ -0.22
MRPL55-213ENST00000366740 DEFB103AP81534 67 aa13.65□□□□□ -0.22
MRPL55-213ENST00000366740 ARHGAP1Q07960 439 aa13.65□□□□□ -0.22
MRPL55-213ENST00000366740 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
MRPL55-213ENST00000366740 GPATCH4Q5T3I0 446 aaKnown RBP13.65□□□□□ -0.22
MRPL55-213ENST00000366740 LRRC8DQ7L1W4 858 aa13.65□□□□□ -0.22
MRPL55-213ENST00000366740 AFG1LQ8WV93 481 aa13.65□□□□□ -0.22
MRPL55-213ENST00000366740 KHSRPQ92945 711 aaKnown RBP eCLIP13.65□□□□□ -0.22
MRPL55-213ENST00000366740 DIAPH3Q9NSV4 1193 aa13.65□□□□□ -0.22
MRPL55-213ENST00000366740 GTF2IRD1Q9UHL9 959 aa13.65□□□□□ -0.22
MRPL55-213ENST00000366740 HCN4Q9Y3Q4 1203 aa13.65□□□□□ -0.22
MRPL55-213ENST00000366740 GPR37L1O60883 481 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 NBNO60934 754 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 GJB5O95377 273 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 GH1P01241 217 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 HAND2P61296 217 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 USH1GQ495M9 461 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 TMEM31Q5JXX7 168 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 GDPD5Q8WTR4 605 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 COL20A1Q9P218 1284 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 ABCB11O95342 1321 aa13.64□□□□□ -0.23
MRPL55-213ENST00000366740 MUC6Q6W4X9 2439 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 ABHD14A-ACY1A0A1B0GW23 586 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 HAS3O00219 553 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 HIP1O00291 1037 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 CKBP12277 381 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 CASTP20810 708 aaKnown RBP13.63□□□□□ -0.23
MRPL55-213ENST00000366740 CHMLP26374 656 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 ERVK-21P61565 698 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 LY6KQ17RY6 165 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 TMCO2Q7Z6W1 182 aaPredicted RBP13.63□□□□□ -0.23
MRPL55-213ENST00000366740 TBC1D5Q92609 795 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
MRPL55-213ENST00000366740 TAAR1Q96RJ0 339 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 IWS1Q96ST2 819 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 SUGCTQ9HAC7 445 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 ZNF318Q5VUA4 2279 aa13.63□□□□□ -0.23
MRPL55-213ENST00000366740 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.62□□□□□ -0.23
MRPL55-213ENST00000366740 LINC01553A4QN01 128 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 PI4K2BG5E9Z4 385 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 EFCAB14O75071 495 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 F2P00734 622 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 GOLGA8HP0CJ92 632 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 MFAP1P55081 439 aaKnown RBP13.62□□□□□ -0.23
MRPL55-213ENST00000366740 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
MRPL55-213ENST00000366740 CDC37Q16543 378 aaPredicted RBP13.62□□□□□ -0.23
MRPL55-213ENST00000366740 TRIM71Q2Q1W2 868 aaKnown RBP13.62□□□□□ -0.23
MRPL55-213ENST00000366740 TRAF7Q6Q0C0 670 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 MFSD6Q6ZSS7 791 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 SEPT14Q6ZU15 432 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 DGKHQ86XP1 1220 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 TBC1D10CQ8IV04 446 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 SYTL5Q8TDW5 730 aaPredicted RBP13.62□□□□□ -0.23
MRPL55-213ENST00000366740 NSUN6Q8TEA1 469 aaKnown RBP13.62□□□□□ -0.23
MRPL55-213ENST00000366740 TGS1Q96RS0 853 aaKnown RBP13.62□□□□□ -0.23
MRPL55-213ENST00000366740 RAD9AQ99638 391 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 CPVLQ9H3G5 476 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 CD320Q9NPF0 282 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 HDAC6Q9UBN7 1215 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 DDX41Q9UJV9 622 aaKnown RBP13.62□□□□□ -0.23
MRPL55-213ENST00000366740 NEDD4P46934 1319 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 MYO7AQ13402 2215 aa13.62□□□□□ -0.23
MRPL55-213ENST00000366740 WDR81Q562E7 1941 aa13.61□□□□□ -0.23
MRPL55-213ENST00000366740 PSEN2P49810 448 aa13.61□□□□□ -0.23
MRPL55-213ENST00000366740 NT5C2P49902 561 aa13.61□□□□□ -0.23
MRPL55-213ENST00000366740 CHMP4BP1P59074 171 aa13.61□□□□□ -0.23
MRPL55-213ENST00000366740 PTK7Q13308 1070 aa13.61□□□□□ -0.23
MRPL55-213ENST00000366740 STXBP2Q15833 593 aa13.61□□□□□ -0.23
MRPL55-213ENST00000366740 DGKDQ16760 1214 aa13.61□□□□□ -0.23
MRPL55-213ENST00000366740 CENPQQ7L2Z9 268 aaPredicted RBP13.61□□□□□ -0.23
MRPL55-213ENST00000366740 ZBED2Q9BTP6 218 aa13.61□□□□□ -0.23
MRPL55-213ENST00000366740 DSCC1Q9BVC3 393 aa13.61□□□□□ -0.23
MRPL55-213ENST00000366740 KATNAL1Q9BW62 490 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms