RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 PLCB2Q00722 1185 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 NHLH1Q02575 133 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 LARP1BQ659C4 914 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 APOA5Q6Q788 366 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 TMEM179Q6ZVK1 233 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 RPUSD2Q8IZ73 545 aaKnown RBP12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 ARHGEF10LQ9HCE6 1279 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 MTMR6Q9Y217 621 aa12.99□□□□□ -0.33
CSNK1E-202ENST00000366216 CACNA1AO00555 2505 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 ATG2AQ2TAZ0 1938 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 VWA5AO00534 786 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 WDR46O15213 610 aaKnown RBP12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 JAK2O60674 1132 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 ACVR2BQ13705 512 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 WTAPQ15007 396 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 SEC23AQ15436 765 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 CCDC144BQ3MJ40 725 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 SPRED2Q7Z698 418 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 IQCA1Q86XH1 822 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 SLC43A3Q8NBI5 491 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 UIMC1Q96RL1 719 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 UBAC1Q9BSL1 405 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 NOC4LQ9BVI4 516 aaKnown RBP12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 KATNBL1Q9H079 304 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 WNT8AQ9H1J5 351 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 SH2D4AQ9H788 454 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 NAP1L2Q9ULW6 460 aaPredicted RBP12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 ATP6V1DQ9Y5K8 247 aa12.98□□□□□ -0.33
CSNK1E-202ENST00000366216 PTPDC1A2A3K4 754 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 CCDC69A6NI79 296 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 ZBTB43O43298 467 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 RANBP6O60518 1105 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 F13A1P00488 732 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 METAP2P50579 478 aaKnown RBP eCLIP12.97□□□□□ -0.334e-7■■□□□ 12
CSNK1E-202ENST00000366216 PPP2R5BQ15173 497 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 SYNE3Q6ZMZ3 975 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 NFXL1Q6ZNB6 911 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 ZNF467Q7Z7K2 595 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 FAM184AQ8NB25 1140 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 ARNTL2Q8WYA1 636 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 ZSCAN10Q96SZ4 725 aaPredicted RBP12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 ABHD16BQ9H3Z7 469 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 ZNF287Q9HBT7 754 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 NCOA5Q9HCD5 579 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 PPP1R9AQ9ULJ8 1098 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 SLC12A7Q9Y666 1083 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 DDX49Q9Y6V7 483 aaKnown RBP12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 SCN10AQ9Y5Y9 1956 aa12.97□□□□□ -0.33
CSNK1E-202ENST00000366216 TNKSO95271 1327 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 CDKL5O76039 1030 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 NKX3-2P78367 333 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 BEX3Q00994 111 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 TAP1Q03518 808 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 ICA1Q05084 483 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 CCDC178Q5BJE1 867 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 TMEM63BQ5T3F8 832 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 CPLX2Q6PUV4 134 aaKnown RBP12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 STK11IPQ8N1F8 1099 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 DDX11Q96FC9 970 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 NUP88Q99567 741 aaPredicted RBP12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 TRPV6Q9H1D0 765 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 KCNH6Q9H252 994 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 SENP2Q9HC62 589 aa12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.96□□□□□ -0.33
CSNK1E-202ENST00000366216 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 CPLX1O14810 134 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 B4GALT4O60513 344 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 PFKMP08237 780 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 ALADP13716 330 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 GRB10Q13322 594 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 ITGA7Q13683 1181 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 SKOR2Q2VWA4 1001 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 FAM83BQ5T0W9 1011 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 FOXD4L5Q5VV16 416 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 MCTP1Q6DN14 999 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 CXCL17Q6UXB2 119 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 C16orf86Q6ZW13 317 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 ENAHQ8N8S7 591 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 FOXD4L4Q8WXT5 416 aaPredicted RBP12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 SCLYQ96I15 445 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 FBXL18Q96ME1 805 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 AGBL1Q96MI9 1066 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 ZKSCAN3Q9BRR0 538 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 SEZ6LQ9BYH1 1024 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 TCP11L1Q9NUJ3 509 aa12.95□□□□□ -0.34
CSNK1E-202ENST00000366216 KMT2EQ8IZD2 1858 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 CCDC196A0A1B0GTZ2 297 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 VPS37CA5D8V6 355 aaPredicted RBP12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 TSPY2A6NKD2 308 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 GOLGA8AA7E2F4 631 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 LPXNO60711 386 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 PRDM1O75626 825 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 CABYRO75952 493 aa12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 FDPSP14324 419 aaKnown RBP12.94□□□□□ -0.34
CSNK1E-202ENST00000366216 IFIT1BQ5T764 474 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms