RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 MYCT1Q8N699 235 aa12.97□□□□□ -0.33
HPS1-204ENST00000361490 MRIQ9BWK5 157 aa12.97□□□□□ -0.33
HPS1-204ENST00000361490 hCG_1984214I3L0E3 225 aa12.96□□□□□ -0.33
HPS1-204ENST00000361490 GCNT3O95395 438 aa12.96□□□□□ -0.33
HPS1-204ENST00000361490 FOSP01100 380 aaPredicted RBP12.96□□□□□ -0.33
HPS1-204ENST00000361490 FKBP15Q5T1M5 1219 aa12.96□□□□□ -0.33
HPS1-204ENST00000361490 CACNA2D4Q7Z3S7 1137 aa12.96□□□□□ -0.33
HPS1-204ENST00000361490 CCDC65Q8IXS2 484 aa12.96□□□□□ -0.33
HPS1-204ENST00000361490 ZNF713Q8N859 430 aaPredicted RBP12.96□□□□□ -0.33
HPS1-204ENST00000361490 BANK1Q8NDB2 785 aa12.96□□□□□ -0.33
HPS1-204ENST00000361490 AK8Q96MA6 479 aa12.96□□□□□ -0.33
HPS1-204ENST00000361490 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.34
HPS1-204ENST00000361490 PLA2G4BP0C869 781 aa12.96□□□□□ -0.34
HPS1-204ENST00000361490 DCAF17Q5H9S7 520 aaPredicted RBP12.96□□□□□ -0.34
HPS1-204ENST00000361490 ZNF658Q5TYW1 1059 aaPredicted RBP12.96□□□□□ -0.34
HPS1-204ENST00000361490 TRIML1Q8N9V2 468 aa12.96□□□□□ -0.34
HPS1-204ENST00000361490 RMDN3Q96TC7 470 aa12.96□□□□□ -0.34
HPS1-204ENST00000361490 ZSWIM4Q9H7M6 989 aa12.96□□□□□ -0.34
HPS1-204ENST00000361490 MRPL44Q9H9J2 332 aaKnown RBP12.96□□□□□ -0.34
HPS1-204ENST00000361490 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.34
HPS1-204ENST00000361490 FAM207AQ9NSI2 230 aaPredicted RBP12.96□□□□□ -0.34
HPS1-204ENST00000361490 C4AP0C0L4 1744 aa12.96□□□□□ -0.34
HPS1-204ENST00000361490 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.34
HPS1-204ENST00000361490 IKBKBO14920 756 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 FKBP1AP62942 108 aaKnown RBP12.95□□□□□ -0.34
HPS1-204ENST00000361490 PDE4CQ08493 712 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 TRERF1Q96PN7 1200 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 MYMKA6NI61 221 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 UTP14CQ5TAP6 766 aaKnown RBP12.95□□□□□ -0.34
HPS1-204ENST00000361490 KCNK18Q7Z418 384 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
HPS1-204ENST00000361490 ENOX1Q8TC92 643 aaKnown RBP12.95□□□□□ -0.34
HPS1-204ENST00000361490 TRIM9Q9C026 710 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 ZNHIT6Q9NWK9 470 aaKnown RBP12.95□□□□□ -0.34
HPS1-204ENST00000361490 SBF2Q86WG5 1849 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 IGKV6D-41A0A0C4DH26 115 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 B4DLN1 442 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 FAM86B1E9PN63 330 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 URI1O94763 535 aaPredicted RBP12.95□□□□□ -0.34
HPS1-204ENST00000361490 FAM86B2P0C5J1 330 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 NCAPHQ15003 741 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 FAM26FQ5R3K3 315 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 SPECC1LQ69YQ0 1117 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 MIER3Q7Z3K6 550 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 CCDC150Q8NCX0 1101 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 CCDC112Q8NEF3 446 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 GMLQ99445 158 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 BAG1Q99933 345 aaPredicted RBP12.95□□□□□ -0.34
HPS1-204ENST00000361490 RNF146Q9NTX7 359 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 DNAI1Q9UI46 699 aa12.95□□□□□ -0.34
HPS1-204ENST00000361490 ZBTB39O15060 712 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 IBSPP21815 317 aaPredicted RBP12.94□□□□□ -0.34
HPS1-204ENST00000361490 TMEM132AQ24JP5 1023 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 ARHGAP29Q52LW3 1261 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 TDRD12Q587J7 1177 aaKnown RBP12.94□□□□□ -0.34
HPS1-204ENST00000361490 RNF207Q6ZRF8 634 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 FAM83AQ86UY5 434 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 FAM160B2Q86V87 743 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 SLFN12Q8IYM2 578 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 DAGLBQ8NCG7 672 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 FEM1BQ9UK73 627 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 PCDHB13Q9Y5F0 798 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 BCORQ6W2J9 1755 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 ARHGEF35A5YM69 484 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 VCAM1P19320 739 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 KRT9P35527 623 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 BAATQ14032 418 aaPredicted RBP12.94□□□□□ -0.34
HPS1-204ENST00000361490 ZNF280CQ8ND82 737 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 CTAGE1Q96RT6 745 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 MTRQ99707 1265 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 TAF1LQ8IZX4 1826 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 USP27XA6NNY8 438 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 MEIS2O14770 477 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 CLIC2O15247 247 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 SNHG28P0DPA3 235 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 GCFC2P16383 781 aaKnown RBP12.94□□□□□ -0.34
HPS1-204ENST00000361490 CASP14P31944 242 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 MATR3P43243 847 aaKnown RBP eCLIP12.94□□□□□ -0.34
HPS1-204ENST00000361490 SYT10Q6XYQ8 523 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 SEPT14Q6ZU15 432 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 GMCL1Q96IK5 515 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 NT5C3AQ9H0P0 336 aa12.94□□□□□ -0.34
HPS1-204ENST00000361490 CHD4Q14839 1912 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 GNG11P61952 73 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 PDXDC2PQ6P474 469 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 SMCR8Q8TEV9 937 aaPredicted RBP12.93□□□□□ -0.34
HPS1-204ENST00000361490 MKL1Q969V6 931 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 DYDC2Q96IM9 177 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 CCSER1Q9C0I3 900 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 RABGAP1Q9Y3P9 1069 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 ESYT2A0FGR8 921 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 CCDC169A6NNP5 214 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 AKR1B15C9JRZ8 316 aaPredicted RBP12.93□□□□□ -0.34
HPS1-204ENST00000361490 RPS12P25398 132 aaKnown RBP12.93□□□□□ -0.34
HPS1-204ENST00000361490 SMARCA1P28370 1054 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 ERCC5P28715 1186 aaPredicted RBP12.93□□□□□ -0.34
HPS1-204ENST00000361490 PSMC6P62333 389 aa12.93□□□□□ -0.34
HPS1-204ENST00000361490 MDM2Q00987 491 aaPredicted RBP12.93□□□□□ -0.34
HPS1-204ENST00000361490 SPAG1Q07617 926 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms