RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 FAM133AQ8N9E0 248 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 GJA10Q969M2 543 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 ARHGEF10LQ9HCE6 1279 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 ARHGAP10A1A4S6 786 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 POLR2BP30876 1174 aaKnown RBP14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 LLGL1Q15334 1064 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 TRIP13Q15645 432 aaPredicted RBP14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 ZNF658Q5TYW1 1059 aaPredicted RBP14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 SARM1Q6SZW1 724 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 LPIN2Q92539 896 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 ZSCAN10Q96SZ4 725 aaPredicted RBP14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 CD109Q6YHK3 1445 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 INSRP06213 1382 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 CARMIL3Q8ND23 1372 aa14.52□□□□□ -0.08
CCDC144A-203ENST00000360495 GSTA4O15217 222 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 SCG2P13521 617 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 KIF11P52732 1056 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 FAM47EQ6ZV65 393 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 GSPT2Q8IYD1 628 aaKnown RBP14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 LINC00301Q8NCQ3 95 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 TRIM55Q9BYV6 548 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 GINS2Q9Y248 185 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 COL4A3BPQ9Y5P4 624 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 CFAP73A6NFT4 308 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 SLFN14P0C7P3 912 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 SPARCL1Q14515 664 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 ZFP69BQ9UJL9 534 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 NPATQ14207 1427 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 MFAP3LO75121 409 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 TMTC4Q5T4D3 741 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 C1orf146Q5VVC0 180 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 MAP7D3Q8IWC1 876 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 PIK3R5Q8WYR1 880 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 DCAF5Q96JK2 942 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 ECT2Q9H8V3 914 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 PPARGC1AQ9UBK2 798 aaKnown RBP14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 SATB2Q9UPW6 733 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 FIS1Q9Y3D6 152 aa14.52□□□□□ -0.09
CCDC144A-203ENST00000360495 NEK2P51955 445 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 FAM102BQ5T8I3 360 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 SSH3Q8TE77 659 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 CCDC127Q96BQ5 260 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 DTNBP1Q96EV8 351 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 RWDD2AQ9UIY3 292 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 DLATP10515 647 aaKnown RBP14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 YARSP54577 528 aaKnown RBP14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 GCKRQ14397 625 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 MAGOHP61326 146 aaKnown RBP14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 MDM2Q00987 491 aaPredicted RBP14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 RAB44Q7Z6P3 723 aaPredicted RBP14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 NSUN7Q8NE18 718 aaKnown RBP14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 ENO4A6NNW6 628 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 ELF1P32519 619 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 PTK2Q05397 1052 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 RGS9BPQ6ZS82 235 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 CUEDC2Q9H467 287 aa14.51□□□□□ -0.09
CCDC144A-203ENST00000360495 TRIM66O15016 1216 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 ARHGEF9O43307 516 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 SRGAP2O75044 1071 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 AFPP02771 609 aaKnown RBP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 NR2F2P24468 414 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 MFAP3P55082 362 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 ARMCX5Q6P1M9 558 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 NBPF3Q9H094 633 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 KCNG1Q9UIX4 513 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 TTI1O43156 1089 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 CYP2C19P33261 490 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 PPP2R2AP63151 447 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 PLCB4Q15147 1175 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 C10orf76Q5T2E6 689 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 GPKOWQ92917 476 aaPredicted RBP eCLIP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 ACSBG1Q96GR2 724 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 CSRNP1Q96S65 589 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 KIFC3Q9BVG8 833 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 DNAJC17Q9NVM6 304 aaKnown RBP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 EIF2AK4Q9P2K8 1649 aaKnown RBP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 ADGRL1O94910 1474 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 URB2Q14146 1524 aaKnown RBP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 TAF5LO75529 589 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 SERPING1P05155 500 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 SLC30A9Q6PML9 568 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 SESTD1Q86VW0 696 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 TTLL11Q8NHH1 800 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 DEPTORQ8TB45 409 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 MAP4K1Q92918 833 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 ETNK1Q9HBU6 452 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 PAIP2BQ9ULR5 123 aaKnown RBP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 TNKSO95271 1327 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 NOP56O00567 594 aaKnown RBP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 BASP1P80723 227 aaKnown RBP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 AOC3Q16853 763 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 SMCR8Q8TEV9 937 aaPredicted RBP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 TRIM11Q96F44 468 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 PTPRKQ15262 1439 aa14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 COL17A1Q9UMD9 1497 aaPredicted RBP14.5□□□□□ -0.09
CCDC144A-203ENST00000360495 LIG4P49917 911 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 CRLF3Q8IUI8 442 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 MIS12Q9H081 205 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 EPC1Q9H2F5 836 aa14.49□□□□□ -0.09
CCDC144A-203ENST00000360495 FOXP1Q9H334 677 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms