RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 ZBTB21Q9ULJ3 1066 aa10.9□□□□□ -0.66
SIN3A-201ENST00000360439 BICDL2A1A5D9 508 aa10.9□□□□□ -0.67
SIN3A-201ENST00000360439 MYCP01106 439 aaPredicted RBP10.9□□□□□ -0.67
SIN3A-201ENST00000360439 SRGNP10124 158 aa10.9□□□□□ -0.67
SIN3A-201ENST00000360439 CORO7P57737 925 aa10.9□□□□□ -0.67
SIN3A-201ENST00000360439 DPCR1Q3MIW9 517 aa10.9□□□□□ -0.67
SIN3A-201ENST00000360439 PDCD7Q8N8D1 485 aaKnown RBP10.9□□□□□ -0.67
SIN3A-201ENST00000360439 SREK1Q8WXA9 508 aaKnown RBP10.9□□□□□ -0.67
SIN3A-201ENST00000360439 DHX58Q96C10 678 aa10.9□□□□□ -0.67
SIN3A-201ENST00000360439 RPGRIP1Q96KN7 1286 aa10.9□□□□□ -0.67
SIN3A-201ENST00000360439 MED1Q15648 1581 aaPredicted RBP10.9□□□□□ -0.67
SIN3A-201ENST00000360439 ADD2P35612 726 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 EXOSC10Q01780 885 aaKnown RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 PNOCQ13519 176 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 THEMIS2Q5TEJ8 643 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 ANKRD23Q86SG2 305 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 SPAG5Q96R06 1193 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 FOXP1Q9H334 677 aaPredicted RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 NFE2L3Q9Y4A8 694 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 POLRMTO00411 1230 aaKnown RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 BACH1O14867 736 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 KRT86O43790 486 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 E2F6O75461 281 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 SF3A3Q12874 501 aaKnown RBP eCLIP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 KCNB1Q14721 858 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 ZC3H12AQ5D1E8 599 aaKnown RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 DAAM2Q86T65 1068 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 NCAPG2Q86XI2 1143 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 DIS3L2Q8IYB7 885 aaKnown RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 LRRC43Q8N309 656 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 USP33Q8TEY7 942 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 MYO1AQ9UBC5 1043 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 FRMPD2Q68DX3 1309 aaPredicted RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 SUPT3HO75486 399 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 ALAS1P13196 640 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 GMPSP49915 693 aaPredicted RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 RASSF7Q02833 373 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 MYO1EQ12965 1108 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 ZNF569Q5MCW4 686 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 LCA5Q86VQ0 697 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 CCDC170Q8IYT3 715 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 WRNIP1Q96S55 665 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 MXD3Q9BW11 206 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 PUS7LQ9H0K6 701 aaKnown RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 VCX3BQ9H321 246 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 VCX3AQ9NNX9 186 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 GPHNQ9NQX3 736 aaPredicted RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 SCAF8Q9UPN6 1271 aaKnown RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 hCG_1642624A0A1W2PR95 340 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 PSMD14O00487 310 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 PSMA7O14818 248 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 FMNL1O95466 1100 aaPredicted RBP10.89□□□□□ -0.67
SIN3A-201ENST00000360439 IDEP14735 1019 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 SPATA21Q7Z572 469 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 ARHGAP18Q8N392 663 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 CALML4Q96GE6 196 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 CCDC17Q96LX7 622 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 PLA2G12BQ9BX93 195 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 DRC3Q9H069 523 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 KCND1Q9NSA2 647 aa10.89□□□□□ -0.67
SIN3A-201ENST00000360439 ZNF609O15014 1411 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 PEAK1Q9H792 1746 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 STAT6P42226 847 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 SAPCD2Q86UD0 394 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 FAM204AQ9H8W3 233 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 NOD1Q9Y239 953 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 CD2APQ9Y5K6 639 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 A6NNZ2 444 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 PAFAH1B1P43034 410 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 MYBPC2Q14324 1141 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 PPP1R7Q15435 360 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 CCDC144BQ3MJ40 725 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 TUBB8Q3ZCM7 444 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 BRDTQ58F21 947 aaPredicted RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 SWT1Q5T5J6 900 aaKnown RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 RESP18Q5W5W9 173 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 SLFN13Q68D06 897 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 ELOA2Q8IYF1 753 aaPredicted RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 EZH1Q92800 747 aaPredicted RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 PPP1R14BQ96C90 147 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 DYNLL2Q96FJ2 89 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 NALCNQ8IZF0 1738 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 NRXN3Q9Y4C0 1643 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 CYP2D7A0A087X1C5 515 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 FAM196BA6NMK8 535 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 TMEM232C9JQI7 657 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 GOLGA8HP0CJ92 632 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 AFMP43652 599 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 SCNN1BP51168 640 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 RCAN1P53805 252 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 MAP7Q14244 749 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 RCN1Q15293 331 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 STRIP1Q5VSL9 837 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 SH3RF3Q8TEJ3 882 aaPredicted RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 GFM2Q969S9 779 aaKnown RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 NDEL1Q9GZM8 345 aa10.88□□□□□ -0.67
SIN3A-201ENST00000360439 SH2B2O14492 632 aaPredicted RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 POLR2DO15514 142 aaKnown RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 PCP11498 1178 aaKnown RBP10.88□□□□□ -0.67
SIN3A-201ENST00000360439 DDR1Q08345 913 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms