RNA–Protein interactions for RNA: ENST00000360392.4

TRIM9-203, Transcript of tripartite motif containing 9, humanhuman

TSL 1 (best) BASIC

Gene TRIM9, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-203ENST00000360392 PP2D1A8MPX8 630 aa10.79□□□□□ -0.68
TRIM9-203ENST00000360392 KRT14P02533 472 aa10.79□□□□□ -0.68
TRIM9-203ENST00000360392 LSP1P33241 339 aa10.79□□□□□ -0.68
TRIM9-203ENST00000360392 PRCPP42785 496 aa10.79□□□□□ -0.68
TRIM9-203ENST00000360392 SOGA3Q5TF21 947 aa10.79□□□□□ -0.68
TRIM9-203ENST00000360392 FAM196AQ6ZSG2 479 aa10.79□□□□□ -0.68
TRIM9-203ENST00000360392 NLRP14Q86W24 1093 aa10.79□□□□□ -0.68
TRIM9-203ENST00000360392 LMNTD2Q8IXW0 634 aa10.79□□□□□ -0.68
TRIM9-203ENST00000360392 SMCR8Q8TEV9 937 aaPredicted RBP10.79□□□□□ -0.68
TRIM9-203ENST00000360392 ARHGEF1Q92888 912 aaKnown RBP10.79□□□□□ -0.68
TRIM9-203ENST00000360392 USP17L3A6NCW0 530 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 USP17L4A6NCW7 530 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 BUB1O43683 1085 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 GTPBP6O43824 516 aaPredicted RBP10.78□□□□□ -0.68
TRIM9-203ENST00000360392 HDLBPQ00341 1268 aaKnown RBP10.78□□□□□ -0.68
TRIM9-203ENST00000360392 USP17L1Q7RTZ2 530 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 TRIM58Q8NG06 486 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 TGFBRAP1Q8WUH2 860 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 CCDC97Q96F63 343 aaPredicted RBP10.78□□□□□ -0.68
TRIM9-203ENST00000360392 IFIH1Q9BYX4 1025 aaKnown RBP10.78□□□□□ -0.68
TRIM9-203ENST00000360392 CHCHD3Q9NX63 227 aaKnown RBP10.78□□□□□ -0.68
TRIM9-203ENST00000360392 TAF1P21675 1872 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 ABCC12Q96J65 1359 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 C6orf229H3BNL8 230 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 WNT7AO00755 349 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 INF2Q27J81 1249 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 DYMQ7RTS9 669 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 ITFG2Q969R8 447 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 PSMD1Q99460 953 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 RNF26Q9BY78 433 aaPredicted RBP10.78□□□□□ -0.68
TRIM9-203ENST00000360392 USP21Q9UK80 565 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 ABCA3Q99758 1704 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 TLDC2A0PJX2 215 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 SMIM23A6NLE4 172 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 VIMP08670 466 aaKnown RBP10.78□□□□□ -0.68
TRIM9-203ENST00000360392 DDR1Q08345 913 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 GRIK5Q16478 980 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 FAM133BQ5BKY9 247 aaKnown RBP10.78□□□□□ -0.68
TRIM9-203ENST00000360392 KCNV2Q8TDN2 545 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 ZNF384Q8TF68 577 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 ARL8AQ96BM9 186 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 STAMBPL1Q96FJ0 436 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 TUBGCP2Q9BSJ2 902 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 VCPKMTQ9H867 229 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 NLRC4Q9NPP4 1024 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 NOP53Q9NZM5 478 aaKnown RBP10.78□□□□□ -0.68
TRIM9-203ENST00000360392 LRWD1Q9UFC0 647 aa10.78□□□□□ -0.68
TRIM9-203ENST00000360392 NWD2Q9ULI1 1742 aa10.77□□□□□ -0.68
TRIM9-203ENST00000360392 WDR19Q8NEZ3 1342 aa10.77□□□□□ -0.68
TRIM9-203ENST00000360392 PAPPAQ13219 1627 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 KRT18P05783 430 aaKnown RBP10.77□□□□□ -0.69
TRIM9-203ENST00000360392 PDHA1P08559 390 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 LACTBP83111 547 aaPredicted RBP10.77□□□□□ -0.69
TRIM9-203ENST00000360392 MDM2Q00987 491 aaPredicted RBP10.77□□□□□ -0.69
TRIM9-203ENST00000360392 TFAP4Q01664 338 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 PICALMQ13492 652 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 TAF11Q15544 211 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 KRT26Q7Z3Y9 468 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 SELENOSQ9BQE4 189 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 PYM1Q9BRP8 204 aaKnown RBP10.77□□□□□ -0.69
TRIM9-203ENST00000360392 BSDC1Q9NW68 430 aaPredicted RBP10.77□□□□□ -0.69
TRIM9-203ENST00000360392 SMARCAL1Q9NZC9 954 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 DISP2A7MBM2 1401 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 ITGB4P16144 1822 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 SPATA31A5Q5VU36 1347 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 SPATA31A7Q8IWB4 1347 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 PPP1R37O75864 691 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 FSBPO95073 299 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 RRAGAQ7L523 313 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.69
TRIM9-203ENST00000360392 B4GALNT2Q8NHY0 566 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 TAF4BQ92750 862 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 FAM210AQ96ND0 272 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 CRNKL1Q9BZJ0 848 aaKnown RBP10.77□□□□□ -0.69
TRIM9-203ENST00000360392 ZCWPW1Q9H0M4 648 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 A1CFQ9NQ94 594 aaKnown RBP10.77□□□□□ -0.69
TRIM9-203ENST00000360392 L3MBTL1Q9Y468 752 aa10.77□□□□□ -0.69
TRIM9-203ENST00000360392 H7C1D1 291 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 TOM1O60784 492 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 PECAM1P16284 738 aaPredicted RBP10.76□□□□□ -0.69
TRIM9-203ENST00000360392 APBA1Q02410 837 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 EPN3Q9H201 632 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 RWDD2AQ9UIY3 292 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 ZNF804BA4D1E1 1349 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 PPP1R3GB7ZBB8 358 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 GCOM1H8Y6P7 765 aaPredicted RBP10.76□□□□□ -0.69
TRIM9-203ENST00000360392 UPP2O95045 317 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 MOCS3O95396 460 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 MYZAPP0CAP1 466 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 MAGEA1P43355 309 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 ATP11AP98196 1134 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 FAM114A1Q8IWE2 563 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 C3orf20Q8ND61 904 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 HVCN1Q96D96 273 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 NHEJ1Q9H9Q4 299 aaPredicted RBP10.76□□□□□ -0.69
TRIM9-203ENST00000360392 ATP6V0A4Q9HBG4 840 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 PAPOLBQ9NRJ5 636 aaKnown RBP10.76□□□□□ -0.69
TRIM9-203ENST00000360392 AGPAT5Q9NUQ2 364 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 SAMD15Q9P1V8 674 aa10.76□□□□□ -0.69
TRIM9-203ENST00000360392 DUSP10Q9Y6W6 482 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms