RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 ACRBPQ8NEB7 543 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 HSPH1Q92598 858 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 TSC22D3Q99576 134 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 CCNL1Q9UK58 526 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 ESRRAP11474 423 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 CAPRIN1Q14444 709 aaKnown RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 PPP2R5EQ16537 467 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 C10orf76Q5T2E6 689 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 LPIN2Q92539 896 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 CALN1Q9BXU9 219 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 KIAA1024Q9UPX6 916 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 AKT3Q9Y243 479 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 ABCC1P33527 1531 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 MAGI1Q96QZ7 1491 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 PI4K2BG5E9Z4 385 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 MYO1FO00160 1098 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 MCF2LO15068 1137 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 KCNA1Q09470 495 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 TBC1D1Q86TI0 1168 aaPredicted RBP12.12□□□□□ -0.47
COL11A1-202ENST00000358392 GRAMD1CQ8IYS0 662 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 FAM133AQ8N9E0 248 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 MTRQ99707 1265 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 TEKT3Q9BXF9 490 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 TXLNGQ9NUQ3 528 aa12.12□□□□□ -0.47
COL11A1-202ENST00000358392 UBN2Q6ZU65 1347 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 SYCE1LA8MT33 242 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 F5H423 210 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 POLR2MP0CAP2 368 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 ADD1P35611 737 aaKnown RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 GTF2IP78347 998 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 SLFN12Q8IYM2 578 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 FAM149B1Q96BN6 582 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 DCAF5Q96JK2 942 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 PALMDQ9NP74 551 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 SLC13A4Q9UKG4 626 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 TPCN1Q9ULQ1 816 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 UBAP1LF5GYI3 381 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 H7C1D1 291 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 PTK2Q05397 1052 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 DHX9Q08211 1270 aaKnown RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 PTGDRQ13258 359 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 SLMAPQ14BN4 828 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 TRPV6Q9H1D0 765 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 MAST3O60307 1309 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 GFPT2O94808 682 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 KRT33BQ14525 404 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 GNPTABQ3T906 1256 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 IQCDQ96DY2 449 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 RPS6KC1Q96S38 1066 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 USP17L21D6R901 530 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 ETF1P62495 437 aaKnown RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 RGS9BPQ6ZS82 235 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 RFX8Q6ZV50 586 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 RSRC2Q7L4I2 434 aaKnown RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 PLA2G4DQ86XP0 818 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 ST13P4Q8IZP2 240 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 C7orf31Q8N865 590 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 WARS2Q9UGM6 360 aaKnown RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 PCDHA7Q9UN72 937 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 SUGT1Q9Y2Z0 365 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 POLR2BP30876 1174 aaKnown RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 MFAP3P55082 362 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 ZC3H12BQ5HYM0 836 aaKnown RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 HIBCHQ6NVY1 386 aaPredicted RBP12.11□□□□□ -0.47
COL11A1-202ENST00000358392 ZBTB33Q86T24 672 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 YIPF3Q9GZM5 350 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 ZMYM6O95789 1325 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 NCKAP5LQ9HCH0 1330 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 H0YIN7 160 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 ECEL1O95672 775 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 OSTNP61366 133 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 TUBGCP2Q9BSJ2 902 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 HAUS4Q9H6D7 363 aa12.11□□□□□ -0.47
COL11A1-202ENST00000358392 ACSL3O95573 720 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 SMAD1Q15797 465 aaKnown RBP12.1□□□□□ -0.47
COL11A1-202ENST00000358392 ANO4Q32M45 955 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 SPATA1Q5VX52 437 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 RINLQ6ZS11 566 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 TTC30AQ86WT1 665 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 CCDC90BQ9GZT6 254 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 GINM1Q9NU53 330 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 BTG4Q9NY30 223 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 USP19O94966 1318 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 PSDA5PKW4 1024 aaPredicted RBP12.1□□□□□ -0.47
COL11A1-202ENST00000358392 MAN1A2O60476 641 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 TBCCQ15814 346 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 NEK8Q86SG6 692 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 ATP8A2Q9NTI2 1148 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 RIMS2Q9UQ26 1411 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 EXOC1LA0A1B0GW35 172 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 EPHB4P54760 987 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 ZNF790Q6PG37 636 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 ZWILCHQ9H900 591 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 A0A0G2JND7 137 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 MEIS1O00470 390 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 SKIP12755 728 aa12.1□□□□□ -0.47
COL11A1-202ENST00000358392 CDO1Q16878 200 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms