RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 THAP9Q9H5L6 903 aa12.56□□□□□ -0.4
CNOT3-202ENST00000358389 GPR108Q9NPR9 543 aa12.56□□□□□ -0.4
CNOT3-202ENST00000358389 PANK4Q9NVE7 773 aa12.56□□□□□ -0.4
CNOT3-202ENST00000358389 ARHGAP20Q9P2F6 1191 aa12.56□□□□□ -0.4
CNOT3-202ENST00000358389 PNMA2Q9UL42 364 aa12.56□□□□□ -0.4
CNOT3-202ENST00000358389 ZNF652Q9Y2D9 606 aa12.56□□□□□ -0.4
CNOT3-202ENST00000358389 GRIK3Q13003 919 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
CNOT3-202ENST00000358389 TTLL7Q6ZT98 887 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 IFNL3Q8IZI9 196 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 ADSSL1Q8N142 457 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 OSBPL1AQ9BXW6 950 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 DDX47Q9H0S4 455 aaKnown RBP12.55□□□□□ -0.4
CNOT3-202ENST00000358389 TSKSQ9UJT2 592 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 STK36Q9NRP7 1315 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 CACNA1FO60840 1977 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 BICDL2A1A5D9 508 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 DCDC2CA8MYV0 355 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 BIRC3Q13489 604 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 MEA1Q16626 185 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 KIAA0753Q2KHM9 967 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 ADAT2Q7Z6V5 191 aaKnown RBP12.55□□□□□ -0.4
CNOT3-202ENST00000358389 CCDC26Q8TAB7 109 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 GOLPH3Q9H4A6 298 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
CNOT3-202ENST00000358389 CNOT8Q9UFF9 292 aaKnown RBP12.55□□□□□ -0.4
CNOT3-202ENST00000358389 PDS5AQ29RF7 1337 aaKnown RBP12.55□□□□□ -0.4
CNOT3-202ENST00000358389 WDR19Q8NEZ3 1342 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 PRKAB2O43741 272 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 PDE6AP16499 860 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 ADD2P35612 726 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 FOXO4P98177 505 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 ZNF444Q8N0Y2 327 aaPredicted RBP12.55□□□□□ -0.4
CNOT3-202ENST00000358389 PSMD1Q99460 953 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
CNOT3-202ENST00000358389 GGA2Q9UJY4 613 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 G3BP2Q9UN86 482 aaKnown RBP12.55□□□□□ -0.4
CNOT3-202ENST00000358389 MAP3K15Q6ZN16 1313 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 WDR17Q8IZU2 1322 aa12.55□□□□□ -0.4
CNOT3-202ENST00000358389 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 KDM6AO15550 1401 aaPredicted RBP12.54□□□□□ -0.4
CNOT3-202ENST00000358389 MGRN1O60291 552 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 TLDC1Q6P9B6 456 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 ZCRB1Q8TBF4 217 aaKnown RBP12.54□□□□□ -0.4
CNOT3-202ENST00000358389 GDF3Q9NR23 364 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 INTS9Q9NV88 658 aaKnown RBP12.54□□□□□ -0.4
CNOT3-202ENST00000358389 TMEM131LA2VDJ0 1609 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 CYP7A1P22680 504 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 SLCO1A2P46721 670 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 ZNF844Q08AG5 666 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 DTHD1Q6ZMT9 781 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 PLBD2Q8NHP8 589 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 TATDN2Q93075 761 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 ACSBG1Q96GR2 724 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 XPO6Q96QU8 1125 aaKnown RBP12.54□□□□□ -0.4
CNOT3-202ENST00000358389 NUCKS1Q9H1E3 243 aaKnown RBP12.54□□□□□ -0.4
CNOT3-202ENST00000358389 LRRD1A4D1F6 860 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 DAPK3O43293 454 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 MCAMP43121 646 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 TMTC2Q8N394 836 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 CCHCR1Q8TD31 782 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 PIK3R5Q8WYR1 880 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 HPS3Q969F9 1004 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 SALL4Q9UJQ4 1053 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 A2ML1A8K2U0 1454 aa12.54□□□□□ -0.4
CNOT3-202ENST00000358389 KRIT1O00522 736 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 POLE2P56282 527 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 ITIH3Q06033 890 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 MTMR3Q13615 1198 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 KLHDC7AQ5VTJ3 777 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 SPICE1Q8N0Z3 855 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 MAGEC3Q8TD91 643 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 C8orf37Q96NL8 207 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 PAGR1Q9BTK6 254 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 KDM4CQ9H3R0 1056 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 PIH1D3Q9NQM4 214 aaKnown RBP12.53□□□□□ -0.4
CNOT3-202ENST00000358389 BAZ2BQ9UIF8 2168 aaKnown RBP12.53□□□□□ -0.4
CNOT3-202ENST00000358389 HIP1RO75146 1068 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 PRLRP16471 622 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 KCNJ2P63252 427 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 SLC9C1Q4G0N8 1177 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 IFIT1BQ5T764 474 aaKnown RBP12.53□□□□□ -0.4
CNOT3-202ENST00000358389 RPUSD2Q8IZ73 545 aaKnown RBP12.53□□□□□ -0.4
CNOT3-202ENST00000358389 ZNF507Q8TCN5 953 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 CCT6BQ92526 530 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 LPIN2Q92539 896 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 P2RX5Q93086 422 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 MTRQ99707 1265 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 ZCWPW1Q9H0M4 648 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 KLHL33A6NCF5 533 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 DNAJC8O75937 253 aaPredicted RBP12.53□□□□□ -0.4
CNOT3-202ENST00000358389 PLEKHA8P1O95397 391 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 CHN1P15882 459 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
CNOT3-202ENST00000358389 ANKRD40Q6AI12 368 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 RASGRP4Q8TDF6 673 aa12.53□□□□□ -0.4
CNOT3-202ENST00000358389 P3H4Q92791 437 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms