RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 CCDC175P0C221 793 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 FECHP22830 423 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 CASQ1P31415 396 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 IREB2P48200 963 aaKnown RBP16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 ZNF157P51786 506 aaPredicted RBP16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 ADCY7P51828 1080 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 TRIM14Q14142 442 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 JAKMIP3Q5VZ66 844 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 CNGA4Q8IV77 575 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 TNS4Q8IZW8 715 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 IGSF22Q8N9C0 903 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 MNS1Q8NEH6 495 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 ANKRD20A12PQ8NF67 263 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 PLIN2Q99541 437 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 GPCPD1Q9NPB8 672 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 FAM53CQ9NYF3 392 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 MYH4Q9Y623 1939 aa16.01■□□□□ 0.15
NIPAL3-203ENST00000358028 FAM155AB1AL88 458 aaPredicted RBP16■□□□□ 0.15
NIPAL3-203ENST00000358028 KLRC4O43908 158 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 URI1O94763 535 aaPredicted RBP16■□□□□ 0.15
NIPAL3-203ENST00000358028 HSPA8P11142 646 aaKnown RBP16■□□□□ 0.15
NIPAL3-203ENST00000358028 PRCPP42785 496 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 GABPB1Q06547 395 aaPredicted RBP16■□□□□ 0.15
NIPAL3-203ENST00000358028 ZNF543Q08ER8 600 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 KRT31Q15323 416 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 PPP1R18Q6NYC8 613 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 RASAL3Q86YV0 1011 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 ADSSL1Q8N142 457 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16■□□□□ 0.15
NIPAL3-203ENST00000358028 UBXN4Q92575 508 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 COA7Q96BR5 231 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 HOOK2Q96ED9 719 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 NOL12Q9UGY1 213 aaKnown RBP eCLIP16■□□□□ 0.15
NIPAL3-203ENST00000358028 V9GYY5 206 aaPredicted RBP16■□□□□ 0.15
NIPAL3-203ENST00000358028 PHIPQ8WWQ0 1821 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 FAM196BA6NMK8 535 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 PLCG1P19174 1290 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 RBL2Q08999 1139 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 ERCC6LQ2NKX8 1250 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 DCAF15Q66K64 600 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 PPP1R3FQ6ZSY5 799 aaPredicted RBP16■□□□□ 0.15
NIPAL3-203ENST00000358028 TOGARAM2Q6ZUX3 1019 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 KRT222Q8N1A0 295 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 LRRC15Q8TF66 581 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 WRNIP1Q96S55 665 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 EHD4Q9H223 541 aa16■□□□□ 0.15
NIPAL3-203ENST00000358028 ARGLU1Q9NWB6 273 aaPredicted RBP16■□□□□ 0.15
NIPAL3-203ENST00000358028 KCNJ18B7U540 433 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 MFAP3LO75121 409 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 TADA3O75528 432 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 RHOBTB3O94955 611 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 SLC10A3P09131 477 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 LBX1P52954 281 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 COPB1P53618 953 aaKnown RBP15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 GNG11P61952 73 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 MAP3K9P80192 1104 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 KCNJ12Q14500 433 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 ZNF341Q9BYN7 854 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 JMJD4Q9H9V9 463 aa15.99■□□□□ 0.15
NIPAL3-203ENST00000358028 PNMA6FA0A0J9YX94 578 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 INPP5BP32019 993 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 CCT6AP40227 531 aaKnown RBP15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 STIM1Q13586 685 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 TUBB2AQ13885 445 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 VGLL4Q14135 290 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 TCP11X2Q5H9J9 407 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 POTEDQ86YR6 584 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 ANKRD13AQ8IZ07 590 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 ADGRF4Q8IZF3 695 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 ZKSCAN4Q969J2 545 aaPredicted RBP15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 ZIC5Q96T25 663 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 TUBB2BQ9BVA1 445 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 TAB2Q9NYJ8 693 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 MAPK8IP1Q9UQF2 711 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 PTPRFP10586 1907 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 MPHOSPH10O00566 681 aaKnown RBP15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 N4BP3O15049 544 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 TECP42680 631 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 MKRN3Q13064 507 aaKnown RBP15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 NOGQ13253 232 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 BMS1Q14692 1282 aaKnown RBP15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 ARHGAP29Q52LW3 1261 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 GIMAP8Q8ND71 665 aaPredicted RBP15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 CCDC47Q96A33 483 aaKnown RBP15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 CCDC17Q96LX7 622 aa15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 DHX36Q9H2U1 1008 aaKnown RBP15.98■□□□□ 0.15
NIPAL3-203ENST00000358028 PHF20L1A8MW92 1017 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 MAP3K10Q02779 954 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 CALCRLQ16602 461 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 CCDC96Q2M329 555 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 GPATCH4Q5T3I0 446 aaKnown RBP15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 TMTC1Q8IUR5 882 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 CPLX3Q8WVH0 158 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 CNKSR2Q8WXI2 1034 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 CCDC102AQ96A19 550 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 MTMR9Q96QG7 549 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 C7orf25Q9BPX7 421 aa15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 MMTAG2Q9BU76 263 aaKnown RBP15.97■□□□□ 0.15
NIPAL3-203ENST00000358028 VPS16Q9H269 839 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms