RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 NCK2O43639 380 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 TECP42680 631 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 MGARPQ8TDB4 240 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 SAAL1Q96ER3 474 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 RNPC3Q96LT9 517 aaKnown RBP10.99□□□□□ -0.65
RNF40-202ENST00000357890 TSG101Q99816 390 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 RIOK1Q9BRS2 568 aaKnown RBP10.99□□□□□ -0.65
RNF40-202ENST00000357890 TRPC5Q9UL62 973 aaPredicted RBP10.99□□□□□ -0.65
RNF40-202ENST00000357890 TPX2Q9ULW0 747 aaKnown RBP10.99□□□□□ -0.65
RNF40-202ENST00000357890 FGFR1OPO95684 399 aaKnown RBP10.99□□□□□ -0.65
RNF40-202ENST00000357890 NAA35Q5VZE5 725 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 NFRKBQ6P4R8 1299 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 RRAGAQ7L523 313 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 MIEF2Q96C03 454 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 NUP58Q9BVL2 599 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 DCP1AQ9NPI6 582 aaPredicted RBP10.99□□□□□ -0.65
RNF40-202ENST00000357890 DISC1Q9NRI5 854 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 CD2APQ9Y5K6 639 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 MYBL2P10244 700 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 PKN1Q16512 942 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 PFKFB3Q16875 520 aaPredicted RBP10.99□□□□□ -0.65
RNF40-202ENST00000357890 KCNV2Q8TDN2 545 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 CELF1Q92879 486 aaKnown RBP10.99□□□□□ -0.65
RNF40-202ENST00000357890 CNOT6LQ96LI5 555 aaKnown RBP10.99□□□□□ -0.65
RNF40-202ENST00000357890 RAB34Q9BZG1 259 aa10.99□□□□□ -0.65
RNF40-202ENST00000357890 ORC4O43929 436 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 SMIM24O75264 130 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 RPS6KA5O75582 802 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 ITPK1Q13572 414 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 CFAP221Q4G0U5 840 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 ARL6IP4Q66PJ3 421 aaKnown RBP10.98□□□□□ -0.65
RNF40-202ENST00000357890 KRT26Q7Z3Y9 468 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 PAIP2Q9BPZ3 127 aaKnown RBP10.98□□□□□ -0.65
RNF40-202ENST00000357890 MLXIPQ9HAP2 919 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 C6orf50Q9HD87 102 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 NLRC4Q9NPP4 1024 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 DMGDHQ9UI17 866 aaKnown RBP10.98□□□□□ -0.65
RNF40-202ENST00000357890 GGT7Q9UJ14 662 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 TACC3Q9Y6A5 838 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 XDHP47989 1333 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 NHSL1Q5SYE7 1610 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 PHLPP1O60346 1717 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 PPP1R37O75864 691 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 EEF1GP26641 437 aaKnown RBP10.98□□□□□ -0.65
RNF40-202ENST00000357890 KCNQ4P56696 695 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 SF3B3Q15393 1217 aaKnown RBP10.98□□□□□ -0.65
RNF40-202ENST00000357890 VPS72Q15906 364 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 WDR66Q8TBY9 1149 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 CPVLQ9H3G5 476 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 NHEJ1Q9H9Q4 299 aaPredicted RBP10.98□□□□□ -0.65
RNF40-202ENST00000357890 STIM2Q9P246 746 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 HYOU1Q9Y4L1 999 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 LAMA4Q16363 1823 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 G3V3G9 751 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 USP17L8P0C7I0 530 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 PRDX5P30044 214 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
RNF40-202ENST00000357890 DCAF8Q5TAQ9 597 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 CDKAL1Q5VV42 579 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 SV2BQ7L1I2 683 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 TRIM58Q8NG06 486 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 HDAC7Q8WUI4 952 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 NSUN4Q96CB9 384 aaKnown RBP10.98□□□□□ -0.65
RNF40-202ENST00000357890 UBXN6Q9BZV1 441 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 PCDHA4Q9UN74 947 aa10.98□□□□□ -0.65
RNF40-202ENST00000357890 NOVA2Q9UNW9 492 aaKnown RBP10.98□□□□□ -0.65
RNF40-202ENST00000357890 ZNF804BA4D1E1 1349 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 SPATA31A1Q5TZJ5 1347 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 LGALS16A8MUM7 142 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 CEP104O60308 925 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 HMGB2P26583 209 aaKnown RBP10.97□□□□□ -0.65
RNF40-202ENST00000357890 PROCA1Q8NCQ7 364 aaPredicted RBP10.97□□□□□ -0.65
RNF40-202ENST00000357890 DYNLL2Q96FJ2 89 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 MED15Q96RN5 788 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 AGPAT5Q9NUQ2 364 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 LIMA1Q9UHB6 759 aaKnown RBP10.97□□□□□ -0.65
RNF40-202ENST00000357890 DUSP10Q9Y6W6 482 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 WNT7AO00755 349 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 TMOD1P28289 359 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 GNA11P29992 359 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 TNNI2P48788 182 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 TNNC1P63316 161 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 LACTBP83111 547 aaPredicted RBP10.97□□□□□ -0.65
RNF40-202ENST00000357890 CNNM4Q6P4Q7 775 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 CYB5D1Q6P9G0 228 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 KCNV1Q6PIU1 500 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 ZIM3Q96PE6 472 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 DPH5Q9H2P9 285 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 TRAF5O00463 557 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 MXRA7P84157 204 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 NONOQ15233 471 aaKnown RBP eCLIP10.97□□□□□ -0.65
RNF40-202ENST00000357890 CCDC6Q16204 474 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 KCTD19Q17RG1 926 aaPredicted RBP10.97□□□□□ -0.65
RNF40-202ENST00000357890 CAPRIN2Q6IMN6 1127 aaKnown RBP10.97□□□□□ -0.65
RNF40-202ENST00000357890 BARGINQ6ZT62 677 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 CCDC25Q86WR0 208 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 MAPKAPK5Q8IW41 473 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 OR2W6PQ8NHA6 318 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 TGFBRAP1Q8WUH2 860 aa10.97□□□□□ -0.65
RNF40-202ENST00000357890 TSGA10Q9BZW7 698 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms