RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 RSBN1LQ6PCB5 846 aaPredicted RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 STAMQ92783 540 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 PBKQ96KB5 322 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 RNF26Q9BY78 433 aaPredicted RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 CNOT10Q9H9A5 744 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 KMT5AQ9NQR1 393 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 FAF1Q9UNN5 650 aaPredicted RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 THRAP3Q9Y2W1 955 aaKnown RBP7.02□□□□□ -1.29
UPF2-201ENST00000356352 RIPOR2Q9Y4F9 1068 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 ABCC4O15439 1325 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 CFAP43Q8NDM7 1665 aa7.02□□□□□ -1.29
UPF2-201ENST00000356352 GADD45BO75293 160 aaPredicted RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 FMNL1O95466 1100 aaPredicted RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 ECEL1O95672 775 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 HSPD1P10809 573 aaKnown RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 MSH2P43246 934 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 PSMD2Q13200 908 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 KAZNQ674X7 775 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 ARMCX2Q7L311 632 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 CCDC197Q8NCU1 140 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 PARD3BQ8TEW8 1205 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 TLK1Q9UKI8 766 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 EPN1Q9Y6I3 576 aaPredicted RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 ZNF804BA4D1E1 1349 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 MAP3K15Q6ZN16 1313 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 KIF21AQ7Z4S6 1674 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 CHEK2O96017 543 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 SAT1P21673 171 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 CIITAP33076 1130 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 EPHB4P54760 987 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 CHRNDQ07001 517 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 SLMAPQ14BN4 828 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 ZSCAN26Q16670 478 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 ARL13BQ3SXY8 428 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 ZNF496Q96IT1 587 aaPredicted RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 hCG_1642624A0A1W2PR95 340 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 NVLO15381 856 aaKnown RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 ACTN1P12814 892 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 PHKG2P15735 406 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 MAP2K2P36507 400 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 TMTC4Q5T4D3 741 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 FAM173BQ6P4H8 233 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 RYBPQ8N488 228 aaPredicted RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 WHAMMQ8TF30 809 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 CCDC127Q96BQ5 260 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 DHX36Q9H2U1 1008 aaKnown RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 SLC39A2Q9NP94 309 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 LMCD1Q9NZU5 365 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 KDM5AP29375 1690 aaKnown RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 CFAP74Q9C0B2 1584 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 KRT1P04264 644 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 CASP2P42575 452 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 ESRRGP62508 458 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 IGBP1P78318 339 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 MAN2A1Q16706 1144 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 KLC3Q6P597 504 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 GIPC2Q8TF65 315 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 NUDCD1Q96RS6 583 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 INTS9Q9NV88 658 aaKnown RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 TRIM35Q9UPQ4 493 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 KIAA1024Q9UPX6 916 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 ATP7AQ04656 1500 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 IFNA8P32881 189 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 TSTA3Q13630 321 aaPredicted RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 FAM186BQ8IYM0 893 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 ZNF653Q96CK0 615 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 SERPINI1Q99574 410 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 UBN1Q9NPG3 1134 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 SLC13A4Q9UKG4 626 aa7.01□□□□□ -1.29
UPF2-201ENST00000356352 PACSIN2Q9UNF0 486 aaPredicted RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 DIS3Q9Y2L1 958 aaKnown RBP7.01□□□□□ -1.29
UPF2-201ENST00000356352 MYOM2P54296 1465 aa7□□□□□ -1.29
UPF2-201ENST00000356352 PEG3Q9GZU2 1588 aa7□□□□□ -1.29
UPF2-201ENST00000356352 IPO5O00410 1097 aaKnown RBP7□□□□□ -1.29
UPF2-201ENST00000356352 PSAPP07602 524 aa7□□□□□ -1.29
UPF2-201ENST00000356352 ETF1P62495 437 aaKnown RBP7□□□□□ -1.29
UPF2-201ENST00000356352 LARP7Q4G0J3 582 aaKnown RBP eCLIP7□□□□□ -1.29
UPF2-201ENST00000356352 KRT39Q6A163 491 aa7□□□□□ -1.29
UPF2-201ENST00000356352 DNAJC24Q6P3W2 148 aa7□□□□□ -1.29
UPF2-201ENST00000356352 TMED8Q6PL24 325 aaPredicted RBP7□□□□□ -1.29
UPF2-201ENST00000356352 SIX6OS1Q8N1H7 587 aa7□□□□□ -1.29
UPF2-201ENST00000356352 SPDYE1Q8NFV5 336 aaPredicted RBP7□□□□□ -1.29
UPF2-201ENST00000356352 RABGGTAQ92696 567 aa7□□□□□ -1.29
UPF2-201ENST00000356352 GPKOWQ92917 476 aaPredicted RBP eCLIP7□□□□□ -1.294e-6■■□□□ 12
UPF2-201ENST00000356352 P2RX5Q93086 422 aa7□□□□□ -1.29
UPF2-201ENST00000356352 TUBGCP2Q9BSJ2 902 aa7□□□□□ -1.29
UPF2-201ENST00000356352 KANSL2Q9H9L4 492 aa7□□□□□ -1.29
UPF2-201ENST00000356352 TXLNGQ9NUQ3 528 aa7□□□□□ -1.29
UPF2-201ENST00000356352 SEC23IPQ9Y6Y8 1000 aaKnown RBP7□□□□□ -1.29
UPF2-201ENST00000356352 WDR62O43379 1518 aa7□□□□□ -1.29
UPF2-201ENST00000356352 PLEKHG3A1L390 1219 aa7□□□□□ -1.29
UPF2-201ENST00000356352 PGRMC1O00264 195 aaKnown RBP7□□□□□ -1.29
UPF2-201ENST00000356352 IKBKBO14920 756 aa7□□□□□ -1.29
UPF2-201ENST00000356352 ZNF189O75820 626 aaPredicted RBP7□□□□□ -1.29
UPF2-201ENST00000356352 NR2F2P24468 414 aa7□□□□□ -1.29
UPF2-201ENST00000356352 VPS41P49754 854 aa7□□□□□ -1.29
UPF2-201ENST00000356352 PTGDRQ13258 359 aa7□□□□□ -1.29
UPF2-201ENST00000356352 SGO2Q562F6 1265 aa7□□□□□ -1.29
UPF2-201ENST00000356352 ZNF658Q5TYW1 1059 aaPredicted RBP7□□□□□ -1.29
UPF2-201ENST00000356352 PPP4R3CPQ6ZMV5 832 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms