RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 RAPGEF5Q92565 580 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 HVCN1Q96D96 273 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 STRCQ7RTU9 1775 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 PPP1R12AO14974 1030 aaPredicted RBP20.84■□□□□ 0.93
PRPF39-201ENST00000355765 CTNNA1P35221 906 aaKnown RBP20.84■□□□□ 0.93
PRPF39-201ENST00000355765 HSPA9P38646 679 aaKnown RBP20.84■□□□□ 0.93
PRPF39-201ENST00000355765 ASIC1P78348 528 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 TROAPQ12815 778 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 FIGNQ5HY92 759 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 FAM114A1Q8IWE2 563 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 CCDC155Q8N6L0 562 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 IQSEC3Q9UPP2 1182 aaPredicted RBP20.84■□□□□ 0.93
PRPF39-201ENST00000355765 SIK3Q9Y2K2 1263 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 TIAM2Q8IVF5 1701 aa20.84■□□□□ 0.93
PRPF39-201ENST00000355765 HNRNPH3P31942 346 aaKnown RBP20.83■□□□□ 0.93
PRPF39-201ENST00000355765 ERVK-9P63128 1117 aa20.83■□□□□ 0.93
PRPF39-201ENST00000355765 CHADLQ6NUI6 762 aa20.83■□□□□ 0.93
PRPF39-201ENST00000355765 DTHD1Q6ZMT9 781 aa20.83■□□□□ 0.93
PRPF39-201ENST00000355765 CCDC50Q8IVM0 306 aa20.83■□□□□ 0.93
PRPF39-201ENST00000355765 ZSCAN29Q8IWY8 852 aaPredicted RBP20.83■□□□□ 0.93
PRPF39-201ENST00000355765 NOVA2Q9UNW9 492 aaKnown RBP20.83■□□□□ 0.93
PRPF39-201ENST00000355765 NMT2O60551 498 aa20.83■□□□□ 0.93
PRPF39-201ENST00000355765 ZNF844Q08AG5 666 aa20.83■□□□□ 0.93
PRPF39-201ENST00000355765 ENOX2Q16206 610 aaKnown RBP20.83■□□□□ 0.93
PRPF39-201ENST00000355765 NLRC4Q9NPP4 1024 aa20.83■□□□□ 0.93
PRPF39-201ENST00000355765 PLCB1Q9NQ66 1216 aa20.83■□□□□ 0.93
PRPF39-201ENST00000355765 BICDL2A1A5D9 508 aa20.83■□□□□ 0.92
PRPF39-201ENST00000355765 LCA5LO95447 670 aa20.83■□□□□ 0.92
PRPF39-201ENST00000355765 MSL1Q68DK7 614 aa20.83■□□□□ 0.92
PRPF39-201ENST00000355765 HIBCHQ6NVY1 386 aaPredicted RBP20.83■□□□□ 0.92
PRPF39-201ENST00000355765 CPLX4Q7Z7G2 160 aa20.83■□□□□ 0.92
PRPF39-201ENST00000355765 UBLCP1Q8WVY7 318 aaPredicted RBP20.83■□□□□ 0.92
PRPF39-201ENST00000355765 GPKOWQ92917 476 aaPredicted RBP eCLIP20.83■□□□□ 0.923e-6■■■■□ 23.6
PRPF39-201ENST00000355765 ATP6V0A4Q9HBG4 840 aa20.83■□□□□ 0.92
PRPF39-201ENST00000355765 SCG2P13521 617 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 NDST4Q9H3R1 872 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 LRRC4CQ9HCJ2 640 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 KBTBD4Q9NVX7 518 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 PJA2O43164 708 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 CTSWP56202 376 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 PPP1R7Q15435 360 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 HLFQ16534 295 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 VWA3BQ502W6 1294 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 ARL6IP4Q66PJ3 421 aaKnown RBP20.82■□□□□ 0.92
PRPF39-201ENST00000355765 ADGRA1Q86SQ6 560 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 PLA2G12BQ9BX93 195 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 NEUROG2Q9H2A3 272 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 TAF1DQ9H5J8 278 aaPredicted RBP20.82■□□□□ 0.92
PRPF39-201ENST00000355765 SLC39A2Q9NP94 309 aa20.82■□□□□ 0.92
PRPF39-201ENST00000355765 RTN2O75298 545 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 TRAPPC10P48553 1259 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 PPP2R5BQ15173 497 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 CACNA2D4Q7Z3S7 1137 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 STAMBPL1Q96FJ0 436 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 THOC1Q96FV9 657 aaKnown RBP20.81■□□□□ 0.92
PRPF39-201ENST00000355765 NOD2Q9HC29 1040 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 RBM28Q9NW13 759 aaKnown RBP20.81■□□□□ 0.92
PRPF39-201ENST00000355765 LRP2BPQ9P2M1 347 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 DCCP43146 1447 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 H0YGN5 161 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 GNAT2P19087 354 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 PLCG1P19174 1290 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 SLC8A1P32418 973 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 FLT3P36888 993 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 CCNHP51946 323 aaPredicted RBP20.81■□□□□ 0.92
PRPF39-201ENST00000355765 PPP2R2AP63151 447 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 EVX2Q03828 476 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 PUM3Q15397 648 aaKnown RBP20.81■□□□□ 0.92
PRPF39-201ENST00000355765 FMNL3Q8IVF7 1028 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 MDM1Q8TC05 714 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 SEMA6BQ9H3T3 888 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 NFS1Q9Y697 457 aa20.81■□□□□ 0.92
PRPF39-201ENST00000355765 ATP6V1G2O95670 118 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 PDE6BP35913 854 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 MAGOHP61326 146 aaKnown RBP20.8■□□□□ 0.92
PRPF39-201ENST00000355765 ELF3P78545 371 aaPredicted RBP20.8■□□□□ 0.92
PRPF39-201ENST00000355765 XRCC4Q13426 336 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 BRINP3Q76B58 766 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 MAGOHBQ96A72 148 aaKnown RBP20.8■□□□□ 0.92
PRPF39-201ENST00000355765 KLRC1P26715 233 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 ECHS1P30084 290 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 MYO1EQ12965 1108 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 GKAP1Q5VSY0 366 aaPredicted RBP20.8■□□□□ 0.92
PRPF39-201ENST00000355765 C1orf131Q8NDD1 294 aaKnown RBP20.8■□□□□ 0.92
PRPF39-201ENST00000355765 TCP11Q8WWU5 503 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 BAP1Q92560 729 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 TATDN2Q93075 761 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 INPP4AQ96PE3 977 aaPredicted RBP20.8■□□□□ 0.92
PRPF39-201ENST00000355765 MTA3Q9BTC8 594 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 GOLPH3Q9H4A6 298 aa20.8■□□□□ 0.92
PRPF39-201ENST00000355765 SRRM3A6NNA2 597 aaPredicted RBP20.79■□□□□ 0.92
PRPF39-201ENST00000355765 BUB1BO60566 1050 aaPredicted RBP20.79■□□□□ 0.92
PRPF39-201ENST00000355765 CYP7A1P22680 504 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 CDC25CP30307 473 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 ARID5AQ03989 594 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 CCT6BQ92526 530 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 TSKSQ9UJT2 592 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 FBXL5Q9UKA1 691 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 MGRN1O60291 552 aa20.79■□□□□ 0.92
PRPF39-201ENST00000355765 BCAMP50895 628 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms