RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 C2orf54Q08AI8 447 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 CEP19Q96LK0 163 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 KIAA1024Q9UPX6 916 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
LMX1B-201ENST00000355497 GAP43P17677 238 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 KRT80Q6KB66 452 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 KLHL29Q96CT2 875 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 SLC38A10Q9HBR0 1119 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 ADD1P35611 737 aaKnown RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 TAF11Q15544 211 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 GADL1Q6ZQY3 521 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 TTC1Q99614 292 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 THOC2Q8NI27 1593 aaKnown RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 HSPD1P10809 573 aaKnown RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 ATP2B4P23634 1241 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 ICA1Q05084 483 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 PABPC4Q13310 644 aaKnown RBP eCLIP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 NCAPG2Q86XI2 1143 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 CCNYQ8ND76 341 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 SDR42E1Q8WUS8 393 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 PHLPP2Q6ZVD8 1323 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 BTBD18B2RXH4 712 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 HNRNPDLO14979 420 aaKnown RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 SYF2O95926 243 aaKnown RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 ART3Q13508 389 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 RYBPQ8N488 228 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 DNAAF3Q8N9W5 541 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 NRBF2Q96F24 287 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 DHTKD1Q96HY7 919 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 FAM81BQ96LP2 452 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 KIF9Q9HAQ2 790 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 ZC4H2Q9NQZ6 224 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 SEPT9Q9UHD8 586 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 FOSP01100 380 aaPredicted RBP16.13■□□□□ 0.17
LMX1B-201ENST00000355497 CYP4F22Q6NT55 531 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 FBXL13Q8NEE6 735 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 UBN1Q9NPG3 1134 aa16.13■□□□□ 0.17
LMX1B-201ENST00000355497 DARS2Q6PI48 645 aaKnown RBP16.12■□□□□ 0.17
LMX1B-201ENST00000355497 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.12■□□□□ 0.17
LMX1B-201ENST00000355497 EDC3Q96F86 508 aaKnown RBP16.12■□□□□ 0.17
LMX1B-201ENST00000355497 APOL6Q9BWW8 343 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 EDC4Q6P2E9 1401 aaKnown RBP16.12■□□□□ 0.17
LMX1B-201ENST00000355497 NR2F2P24468 414 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 DCAF15Q66K64 600 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 ATG16L1Q676U5 607 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 LARP4BQ92615 738 aaKnown RBP16.12■□□□□ 0.17
LMX1B-201ENST00000355497 GSDMAQ96QA5 445 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 ACCSQ96QU6 501 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 SERPINI1Q99574 410 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 SUCLA2Q9P2R7 463 aaPredicted RBP16.12■□□□□ 0.17
LMX1B-201ENST00000355497 SCINQ9Y6U3 715 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 RGS12O14924 1447 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 A0A1W2PQ27 194 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 A0A1W2PQ64 194 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 A0A1W2PQD8 194 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 PPP6R2O75170 966 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 TMED1Q13445 227 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 SPDYE1Q8NFV5 336 aaPredicted RBP16.12■□□□□ 0.17
LMX1B-201ENST00000355497 PBKQ96KB5 322 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 TRIM15Q9C019 465 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 SKIP12755 728 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 PDE6AP16499 860 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 RPS8P62241 208 aaKnown RBP16.12■□□□□ 0.17
LMX1B-201ENST00000355497 CYP4A11Q02928 519 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 KIF22Q14807 665 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 METTL23Q86XA0 190 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 PIP4K2CQ8TBX8 421 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 GPT2Q8TD30 523 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 SNX25Q9H3E2 840 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 ACTR5Q9H9F9 607 aaPredicted RBP16.12■□□□□ 0.17
LMX1B-201ENST00000355497 PYCARDQ9ULZ3 195 aa16.12■□□□□ 0.17
LMX1B-201ENST00000355497 TCP10L2B9ZVM9 353 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
LMX1B-201ENST00000355497 BTDP43251 543 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 SLMAPQ14BN4 828 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 SPOPLQ6IQ16 392 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 SRRM1Q8IYB3 904 aaKnown RBP16.11■□□□□ 0.17
LMX1B-201ENST00000355497 CFAP36Q96G28 342 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 TMEM232C9JQI7 657 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 COBLO75128 1261 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 KRT10P13645 584 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 ARL4AP40617 200 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 EAPPQ56P03 285 aaPredicted RBP16.11■□□□□ 0.17
LMX1B-201ENST00000355497 EP400NLQ6ZTU2 488 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 ZBBXA8MT70 800 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 SLFN13Q68D06 897 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 DEPDC1BQ8WUY9 529 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 P2RX5Q93086 422 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 BASP1P80723 227 aaKnown RBP16.11■□□□□ 0.17
LMX1B-201ENST00000355497 RSRC2Q7L4I2 434 aaKnown RBP16.11■□□□□ 0.17
LMX1B-201ENST00000355497 NUDCD1Q96RS6 583 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 SLC12A6Q9UHW9 1150 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 MED7O43513 233 aa16.11■□□□□ 0.17
LMX1B-201ENST00000355497 DHX9Q08211 1270 aaKnown RBP16.11■□□□□ 0.17
LMX1B-201ENST00000355497 KCTD6Q8NC69 237 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 435 ms