RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 PCMTD1Q96MG8 357 aaPredicted RBP24.79■■□□□ 1.56
NKX2-1-201ENST00000354822 ADAMTSL1Q8N6G6 1762 aa24.79■■□□□ 1.56
NKX2-1-201ENST00000354822 SLX4Q8IY92 1834 aa24.79■■□□□ 1.56
NKX2-1-201ENST00000354822 SLC1A4P43007 532 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 EHBP1Q8NDI1 1231 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 PARD6BQ9BYG5 372 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 DBNDD1Q9H9R9 158 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 REXO2Q9Y3B8 237 aaKnown RBP24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 IPO7O95373 1038 aaKnown RBP24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 EHHADHQ08426 723 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 VWA3BQ502W6 1294 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 CCDC84Q86UT8 332 aaPredicted RBP24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 ZFPM1Q8IX07 1006 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 HPS3Q969F9 1004 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 TSG101Q99816 390 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 NUDT12Q9BQG2 462 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 TRIM34Q9BYJ4 488 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 AGPAT5Q9NUQ2 364 aa24.78■■□□□ 1.56
NKX2-1-201ENST00000354822 RASSF10A6NK89 507 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 EEF2P13639 858 aaKnown RBP24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 SLC15A2Q16348 729 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 SLFN13Q68D06 897 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 DNAJC18Q9H819 358 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 PCDHA1Q9Y5I3 950 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 IDEP14735 1019 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 BRD3Q15059 726 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 MAN2A1Q16706 1144 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 QRICH1Q2TAL8 776 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 CNKSR1Q969H4 720 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 ARFGAP3Q9NP61 516 aa24.77■■□□□ 1.56
NKX2-1-201ENST00000354822 CYP3A7-CYP3A51PA0A087WV96 503 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 EIF3CLB5ME19 914 aaKnown RBP24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 PSMD14O00487 310 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 KRT86O43790 486 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 ABL1P00519 1130 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 CYP3A7P24462 503 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 CC2D1AQ6P1N0 951 aaPredicted RBP24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 TATDN1Q6P1N9 297 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 MOXD1Q6UVY6 613 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 KIAA0825Q8IV33 1275 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 EEF2KMTQ96G04 330 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 EIF3CQ99613 913 aaKnown RBP24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 GUCA1BQ9UMX6 200 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 FAM193AP78312 1265 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 AP3B2Q13367 1082 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 NDST4Q9H3R1 872 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 NHEJ1Q9H9Q4 299 aaPredicted RBP24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 STK32BQ9NY57 414 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 SERPINA10Q9UK55 444 aa24.76■■□□□ 1.55
NKX2-1-201ENST00000354822 CCDC151A5D8V7 595 aa24.75■■□□□ 1.55
NKX2-1-201ENST00000354822 RBM5P52756 815 aaKnown RBP eCLIP24.75■■□□□ 1.55
NKX2-1-201ENST00000354822 DACT2Q5SW24 774 aa24.75■■□□□ 1.55
NKX2-1-201ENST00000354822 TMEM179Q6ZVK1 233 aa24.75■■□□□ 1.55
NKX2-1-201ENST00000354822 MYO6Q9UM54 1294 aa24.75■■□□□ 1.55
NKX2-1-201ENST00000354822 TUBBP07437 444 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 HNRNPH3P31942 346 aaKnown RBP24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 TCP10Q12799 353 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 CCDC122Q5T0U0 273 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 KCNK18Q7Z418 384 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 KIAA1328Q86T90 577 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 SLFN12Q8IYM2 578 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 MYOCDQ8IZQ8 938 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 EPC1Q9H2F5 836 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 KCNQ5Q9NR82 932 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 FAM198AQ9UFP1 575 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 PUF60Q9UHX1 559 aaKnown RBP24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 DDTLA6NHG4 134 aaPredicted RBP24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 CHRNA5P30532 468 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 HERVK_113P62684 666 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 EZH2Q15910 746 aaKnown RBP24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 DNAJC19Q96DA6 116 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 MBOAT7Q96N66 472 aa24.74■■□□□ 1.55
NKX2-1-201ENST00000354822 CTAGE15A4D2H0 777 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 ECE2O60344 883 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 CTAGE8P0CG41 777 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 CDC37Q16543 378 aaPredicted RBP24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 ECM1Q16610 540 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 CTAGE6Q86UF2 777 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 CTAGE4Q8IX94 777 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 CAMKK2Q96RR4 588 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 KCNMB3Q9NPA1 279 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 ZNF646O15015 1829 aaPredicted RBP24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 KLK7P49862 253 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 AMPD2Q01433 879 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 GMCL1P1Q8NEA9 526 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 ANO3Q9BYT9 981 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 PANK4Q9NVE7 773 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 PLAGL2Q9UPG8 496 aa24.73■■□□□ 1.55
NKX2-1-201ENST00000354822 MYH7BA7E2Y1 1941 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 USP17L15C9J2P7 530 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 USP17L13C9JLJ4 530 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 USP17L11C9JVI0 530 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 USP17L18D6R9N7 530 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 USP17L22D6RA61 530 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 USP17L17D6RBQ6 530 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 USP17L19D6RCP7 530 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 USP17L20D6RJB6 530 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 RAD21O60216 631 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 KIF20AO95235 890 aa24.72■■□□□ 1.55
NKX2-1-201ENST00000354822 USP17L24Q0WX57 530 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms