RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 SPDYCQ5MJ68 293 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 NBPF10Q6P3W6 841 aaKnown RBP13.51□□□□□ -0.25
TRERF1-202ENST00000354325 LRP10Q7Z4F1 713 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 SYCE1Q8N0S2 351 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 FAM207AQ9NSI2 230 aaPredicted RBP13.51□□□□□ -0.25
TRERF1-202ENST00000354325 BMP2KQ9NSY1 1161 aaPredicted RBP13.51□□□□□ -0.25
TRERF1-202ENST00000354325 TPX2Q9ULW0 747 aaKnown RBP13.51□□□□□ -0.25
TRERF1-202ENST00000354325 TRIM37O94972 964 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 GNA14O95837 355 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 RIPK1Q13546 671 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 PNMA8AQ86V59 439 aaPredicted RBP13.51□□□□□ -0.25
TRERF1-202ENST00000354325 PSMD1Q99460 953 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.51□□□□□ -0.25
TRERF1-202ENST00000354325 CCT8L1PA6NM43 557 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 PDE8BO95263 885 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 ATP2B2Q01814 1243 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 LRRC63Q05C16 580 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 ZSCAN29Q8IWY8 852 aaPredicted RBP13.51□□□□□ -0.25
TRERF1-202ENST00000354325 KLHL7Q8IXQ5 586 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 BLIDQ8IZY5 108 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 CENPTQ96BT3 561 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 TTYH3Q9C0H2 523 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 TAOK3Q9H2K8 898 aa13.51□□□□□ -0.25
TRERF1-202ENST00000354325 SETD1BQ9UPS6 1966 aaKnown RBP13.5□□□□□ -0.25
TRERF1-202ENST00000354325 ZCRB1Q8TBF4 217 aaKnown RBP13.5□□□□□ -0.25
TRERF1-202ENST00000354325 HINFPQ9BQA5 517 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 ISCA1Q9BUE6 129 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 TRIM7Q9C029 511 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 SLITRK6Q9H5Y7 841 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 NOD2Q9HC29 1040 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 ITGA6P23229 1130 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 PRPHP41219 470 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 TAOK1Q7L7X3 1001 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 BZW2Q9Y6E2 419 aaKnown RBP13.5□□□□□ -0.25
TRERF1-202ENST00000354325 PGRMC1O00264 195 aaKnown RBP13.5□□□□□ -0.25
TRERF1-202ENST00000354325 PAEPP09466 180 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 TMTC3Q6ZXV5 915 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
TRERF1-202ENST00000354325 MAB21L3Q8N8X9 362 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 RIC8AQ9NPQ8 531 aa13.5□□□□□ -0.25
TRERF1-202ENST00000354325 C5orf60A6NFR6 353 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 ORC4O43929 436 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 PI16Q6UXB8 463 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 SV2BQ7L1I2 683 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 CABP7Q86V35 215 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 LMNTD2Q8IXW0 634 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 TBC1D31Q96DN5 1066 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 FAM212AQ96EL1 285 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 NOVA2Q9UNW9 492 aaKnown RBP13.49□□□□□ -0.25
TRERF1-202ENST00000354325 RPSAP08865 295 aaKnown RBP13.49□□□□□ -0.25
TRERF1-202ENST00000354325 DNA2P51530 1060 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 TMEM266Q2M3C6 531 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 IRF2BP1Q8IU81 584 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 DYDC1Q8WWB3 177 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 DUSP10Q9Y6W6 482 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 BUB1O43683 1085 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 CSF1RP07333 972 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 PDXDC1Q6P996 788 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 KRT26Q7Z3Y9 468 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 CASKIN2Q8WXE0 1202 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 TLR10Q9BXR5 811 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 CEP72Q9P209 647 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 RCCD1A6NED2 376 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 GSG1L2A8MUP6 293 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 SART1O43290 800 aaKnown RBP13.49□□□□□ -0.25
TRERF1-202ENST00000354325 CEP104O60308 925 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 CTNND1O60716 968 aaKnown RBP13.49□□□□□ -0.25
TRERF1-202ENST00000354325 KIF4AO95239 1232 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 ATP6V1G2O95670 118 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 STARD3NLO95772 234 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 GLI1P08151 1106 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 ATP5DP30049 168 aa13.49□□□□□ -0.25
TRERF1-202ENST00000354325 SMCR8Q8TEV9 937 aaPredicted RBP13.49□□□□□ -0.25
TRERF1-202ENST00000354325 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 MAGEB6P1A0A0J9YX57 407 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 MGRN1O60291 552 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 CLTAP09496 248 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 CCND1P24385 295 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 BYSLQ13895 437 aaKnown RBP13.48□□□□□ -0.25
TRERF1-202ENST00000354325 ASIC2Q16515 512 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 CAPRIN2Q6IMN6 1127 aaKnown RBP13.48□□□□□ -0.25
TRERF1-202ENST00000354325 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 TATDN2Q93075 761 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 MTRF1LQ9UGC7 380 aaKnown RBP13.48□□□□□ -0.25
TRERF1-202ENST00000354325 TFR2Q9UP52 801 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 MYH8P13535 1937 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 G3V3G9 751 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 KCNK3O14649 394 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 LIN7AO14910 233 aaPredicted RBP13.48□□□□□ -0.25
TRERF1-202ENST00000354325 PALMO75781 387 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 HSD17B3P37058 310 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 ZNF131P52739 623 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 NAB2Q15742 525 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 DCAF8Q5TAQ9 597 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 PROM2Q8N271 834 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 USP38Q8NB14 1042 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 RAB3IPQ96QF0 476 aaPredicted RBP13.48□□□□□ -0.25
TRERF1-202ENST00000354325 SELENOSQ9BQE4 189 aa13.48□□□□□ -0.25
TRERF1-202ENST00000354325 PARP2Q9UGN5 583 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms