RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 PTPN5P54829 565 aa18.72■□□□□ 0.59
DDX55-202ENST00000354291 SESTD1Q86VW0 696 aa18.72■□□□□ 0.59
DDX55-202ENST00000354291 C7orf31Q8N865 590 aa18.72■□□□□ 0.59
DDX55-202ENST00000354291 APPBP2Q92624 585 aa18.72■□□□□ 0.59
DDX55-202ENST00000354291 RANBP17Q9H2T7 1088 aaKnown RBP18.72■□□□□ 0.59
DDX55-202ENST00000354291 HDAC6Q9UBN7 1215 aa18.72■□□□□ 0.59
DDX55-202ENST00000354291 ZDBF2Q9HCK1 2354 aa18.72■□□□□ 0.59
DDX55-202ENST00000354291 RNF113AO15541 343 aaKnown RBP18.71■□□□□ 0.59
DDX55-202ENST00000354291 NMT2O60551 498 aa18.71■□□□□ 0.59
DDX55-202ENST00000354291 PPP4R3BQ5MIZ7 849 aa18.71■□□□□ 0.59
DDX55-202ENST00000354291 ZNF618Q5T7W0 954 aa18.71■□□□□ 0.59
DDX55-202ENST00000354291 KAT2BQ92831 832 aa18.71■□□□□ 0.59
DDX55-202ENST00000354291 ALG1Q9BT22 464 aa18.71■□□□□ 0.59
DDX55-202ENST00000354291 NSUN3Q9H649 340 aaKnown RBP18.71■□□□□ 0.59
DDX55-202ENST00000354291 PLIN4Q96Q06 1357 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 TSPY2A6NKD2 308 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 H3BNC9 293 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 M0R2C6 588 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 LGR5O75473 907 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 MMP3P08254 477 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 CASTP20810 708 aaKnown RBP18.7■□□□□ 0.58
DDX55-202ENST00000354291 PTPRZ1P23471 2315 aaPredicted RBP18.7■□□□□ 0.58
DDX55-202ENST00000354291 RPS6P62753 249 aaKnown RBP18.7■□□□□ 0.58
DDX55-202ENST00000354291 RBL2Q08999 1139 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 LY6KQ17RY6 165 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 HERC4Q5GLZ8 1057 aaPredicted RBP18.7■□□□□ 0.58
DDX55-202ENST00000354291 SYDE2Q5VT97 1194 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 RNF135Q8IUD6 432 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 CLEC4DQ8WXI8 215 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 PBXIP1Q96AQ6 731 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 SAMD11Q96NU1 681 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 NACAP1Q9BZK3 213 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 GTF2IRD1Q9UHL9 959 aa18.7■□□□□ 0.58
DDX55-202ENST00000354291 B4DLN1 442 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 UPP2O95045 317 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 EDNRBP24530 442 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 MRPL12P52815 198 aaKnown RBP18.69■□□□□ 0.58
DDX55-202ENST00000354291 HTRA4P83105 476 aaPredicted RBP18.69■□□□□ 0.58
DDX55-202ENST00000354291 MBTPS1Q14703 1052 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 SEPT14Q6ZU15 432 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 RPAINQ86UA6 219 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 TMEM192Q8IY95 271 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 KBTBD3Q8NAB2 608 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 DBF4BQ8NFT6 615 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 EDAQ92838 391 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 YME1L1Q96TA2 773 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 POP1Q99575 1024 aaKnown RBP18.69■□□□□ 0.58
DDX55-202ENST00000354291 GPCPD1Q9NPB8 672 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 INCENPQ9NQS7 918 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 IL17RBQ9NRM6 502 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 SIP14410 1827 aa18.69■□□□□ 0.58
DDX55-202ENST00000354291 LCTP09848 1927 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 SMARCA5O60264 1052 aaPredicted RBP18.68■□□□□ 0.58
DDX55-202ENST00000354291 GH1P01241 217 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 LTBRP36941 435 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 PSEN2P49810 448 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 ZNF200P98182 395 aaPredicted RBP18.68■□□□□ 0.58
DDX55-202ENST00000354291 PPARAQ07869 468 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 PTK7Q13308 1070 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 TRAF7Q6Q0C0 670 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 DNERQ8NFT8 737 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 SP7Q8TDD2 431 aaPredicted RBP18.68■□□□□ 0.58
DDX55-202ENST00000354291 DCAF4Q8WV16 495 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 WNT8BQ93098 351 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 NAPBQ9H115 298 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 FRMPD2Q68DX3 1309 aaPredicted RBP18.68■□□□□ 0.58
DDX55-202ENST00000354291 TECTAO75443 2155 aa18.68■□□□□ 0.58
DDX55-202ENST00000354291 MYH7P12883 1935 aa18.67■□□□□ 0.58
DDX55-202ENST00000354291 NCK2O43639 380 aa18.67■□□□□ 0.58
DDX55-202ENST00000354291 GFRA3O60609 400 aa18.67■□□□□ 0.58
DDX55-202ENST00000354291 COL19A1Q14993 1142 aa18.67■□□□□ 0.58
DDX55-202ENST00000354291 SMAD2Q15796 467 aaKnown RBP18.67■□□□□ 0.58
DDX55-202ENST00000354291 DGKDQ16760 1214 aa18.67■□□□□ 0.58
DDX55-202ENST00000354291 C20orf194Q5TEA3 1177 aa18.67■□□□□ 0.58
DDX55-202ENST00000354291 CCDC62Q6P9F0 684 aa18.67■□□□□ 0.58
DDX55-202ENST00000354291 SPTBN4Q9H254 2564 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 TMEM221A6NGB7 291 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 M0R296 226 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 MBTPS2O43462 519 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 DLX2Q07687 328 aaPredicted RBP18.66■□□□□ 0.58
DDX55-202ENST00000354291 ARHGAP1Q07960 439 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 TRIM71Q2Q1W2 868 aaKnown RBP18.66■□□□□ 0.58
DDX55-202ENST00000354291 BTNL9Q6UXG8 535 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 FBXO11Q86XK2 927 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
DDX55-202ENST00000354291 PRRX2Q99811 253 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 IGFLR1Q9H665 355 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 ECHDC1Q9NTX5 307 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 FAM86C1Q9NVL1 165 aa18.66■□□□□ 0.58
DDX55-202ENST00000354291 RSPH10B2B2RC85 870 aa18.65■□□□□ 0.58
DDX55-202ENST00000354291 STXBP3O00186 592 aa18.65■□□□□ 0.58
DDX55-202ENST00000354291 RANBP6O60518 1105 aaKnown RBP18.65■□□□□ 0.58
DDX55-202ENST00000354291 ZFYP08048 801 aaPredicted RBP18.65■□□□□ 0.58
DDX55-202ENST00000354291 RSPH10BP0C881 870 aa18.65■□□□□ 0.58
DDX55-202ENST00000354291 THPOP40225 353 aa18.65■□□□□ 0.58
DDX55-202ENST00000354291 CTDSPL2Q05D32 466 aa18.65■□□□□ 0.58
DDX55-202ENST00000354291 TCF15Q12870 199 aa18.65■□□□□ 0.58
DDX55-202ENST00000354291 MFSD10Q14728 455 aa18.65■□□□□ 0.58
DDX55-202ENST00000354291 KIAA0753Q2KHM9 967 aa18.65■□□□□ 0.58
DDX55-202ENST00000354291 TRIM67Q6ZTA4 783 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms