RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 LUC7LQ9NQ29 371 aaKnown RBP8.4□□□□□ -1.06
BRCA1-201ENST00000352993 GDF3Q9NR23 364 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 SAMD15Q9P1V8 674 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 LRRC53A6NM62 1247 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 PRLRP16471 622 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 IFNAR2P48551 515 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 CATIPQ7Z7H3 387 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 ZNF483Q8TF39 744 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-201ENST00000352993 ELAC2Q9BQ52 826 aaKnown RBP8.4□□□□□ -1.06
BRCA1-201ENST00000352993 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 DPH5Q9H2P9 285 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 TAF1DQ9H5J8 278 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-201ENST00000352993 SWAP70Q9UH65 585 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 SALL4Q9UJQ4 1053 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 GGA2Q9UJY4 613 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 FBXL5Q9UKA1 691 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 TRPC6Q9Y210 931 aa8.4□□□□□ -1.06
BRCA1-201ENST00000352993 SOS2Q07890 1332 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-201ENST00000352993 BICDL2A1A5D9 508 aa8.4□□□□□ -1.07
BRCA1-201ENST00000352993 CIAO1O76071 339 aa8.4□□□□□ -1.07
BRCA1-201ENST00000352993 PLEKHA8P1O95397 391 aa8.4□□□□□ -1.07
BRCA1-201ENST00000352993 SLC8A3P57103 927 aa8.4□□□□□ -1.07
BRCA1-201ENST00000352993 KCNV2Q8TDN2 545 aa8.4□□□□□ -1.07
BRCA1-201ENST00000352993 PURBQ96QR8 312 aaKnown RBP8.4□□□□□ -1.07
BRCA1-201ENST00000352993 NOP53Q9NZM5 478 aaKnown RBP8.4□□□□□ -1.07
BRCA1-201ENST00000352993 CD2APQ9Y5K6 639 aa8.4□□□□□ -1.07
BRCA1-201ENST00000352993 TNKSO95271 1327 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 CCT8L1PA6NM43 557 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 RTN2O75298 545 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 UPP2O95045 317 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 MAP3K12Q12852 859 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 IFIT1BQ5T764 474 aaKnown RBP8.39□□□□□ -1.07
BRCA1-201ENST00000352993 KLHDC7AQ5VTJ3 777 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 ANKRD40Q6AI12 368 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 RCSD1Q6JBY9 416 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 ZNF662Q6ZS27 426 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 DYDC1Q8WWB3 177 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 P2RX5Q93086 422 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 RNF26Q9BY78 433 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-201ENST00000352993 CNOT8Q9UFF9 292 aaKnown RBP8.39□□□□□ -1.07
BRCA1-201ENST00000352993 TSKSQ9UJT2 592 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 HEG1Q9ULI3 1381 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 GCP02774 474 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 PHKA1P46020 1223 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 ATP2C1P98194 919 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-201ENST00000352993 XRCC4Q13426 336 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 TLDC1Q6P9B6 456 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 DTHD1Q6ZMT9 781 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 BZW1Q7L1Q6 419 aaKnown RBP8.39□□□□□ -1.07
BRCA1-201ENST00000352993 MAEAQ7L5Y9 396 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 UHMK1Q8TAS1 419 aaKnown RBP8.39□□□□□ -1.07
BRCA1-201ENST00000352993 HPS3Q969F9 1004 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 CHMP6Q96FZ7 201 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 BATF3Q9NR55 127 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 C15orf41Q9Y2V0 281 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 KDM3BQ7LBC6 1761 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 CASZ1Q86V15 1759 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 FAM170AA1A519 330 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 DCDC2CA8MYV0 355 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
BRCA1-201ENST00000352993 ZNF844Q08AG5 666 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 UBE3CQ15386 1083 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 GNPTABQ3T906 1256 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 THEMIS2Q5TEJ8 643 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 CD302Q8IX05 232 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 LPIN2Q92539 896 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 EPB41L4AQ9HCS5 686 aaPredicted RBP8.39□□□□□ -1.07
BRCA1-201ENST00000352993 ATP8A1Q9Y2Q0 1164 aa8.39□□□□□ -1.07
BRCA1-201ENST00000352993 EPHB6O15197 1021 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 MGRN1O60291 552 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 TNFRSF8P28908 595 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 BIRC3Q13489 604 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 RPS6KA1Q15418 735 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 KIAA0753Q2KHM9 967 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 ARMC9Q7Z3E5 817 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 MAGEC3Q8TD91 643 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 RASGRP4Q8TDF6 673 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 PHF20Q9BVI0 1012 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 DDX47Q9H0S4 455 aaKnown RBP8.38□□□□□ -1.07
BRCA1-201ENST00000352993 RNF41Q9H4P4 317 aaPredicted RBP8.38□□□□□ -1.07
BRCA1-201ENST00000352993 SLC39A2Q9NP94 309 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 PLCB1Q9NQ66 1216 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 IRAK4Q9NWZ3 460 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 PLAGL2Q9UPG8 496 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 DISP2A7MBM2 1401 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 COL18A1P39060 1754 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 RASSF10A6NK89 507 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 SNX1Q13596 522 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 TTI2Q6NXR4 508 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 CCDC155Q8N6L0 562 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 AGAP11Q8TF27 550 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 ESR2Q92731 530 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 TATDN2Q93075 761 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 PSMD1Q99460 953 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 GOLPH3Q9H4A6 298 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 DISC1Q9NRI5 854 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 PANK4Q9NVE7 773 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 SLAIN2Q9P270 581 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 RNF14Q9UBS8 474 aa8.38□□□□□ -1.07
BRCA1-201ENST00000352993 PNMA2Q9UL42 364 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms