RNA–Protein interactions for RNA: ENST00000351817.4

NKX2-4-201, Transcript of NK2 homeobox 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-4, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-4-201ENST00000351817 TMEM119Q4V9L6 283 aa24.44■■□□□ 1.5
NKX2-4-201ENST00000351817 FOXR2Q6PJQ5 311 aa24.44■■□□□ 1.5
NKX2-4-201ENST00000351817 RIC8AQ9NPQ8 531 aa24.44■■□□□ 1.5
NKX2-4-201ENST00000351817 POTEMA6NI47 508 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 GYS2P54840 703 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 PPP4R3AQ6IN85 833 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 CAPZA3Q96KX2 299 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 GPCPD1Q9NPB8 672 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 PNMA6FA0A0J9YX94 578 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 IDEP14735 1019 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 AKR1B1P15121 316 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 HNRNPH2P55795 449 aaKnown RBP24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 MAP9Q49MG5 647 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 DUSP10Q9Y6W6 482 aa24.43■■□□□ 1.5
NKX2-4-201ENST00000351817 MACROD2A1Z1Q3 448 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 ZNF263O14978 683 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 EHHADHQ08426 723 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 PICALMQ13492 652 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 DPP8Q6V1X1 898 aaPredicted RBP24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 DDX12PQ92771 950 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 TSG101Q99816 390 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 VPS18Q9P253 973 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 C6orf229H3BNL8 230 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 TTLL1O95922 423 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 TNNI2P48788 182 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 ZNF543Q08ER8 600 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 HSP90B2PQ58FF3 399 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 IQCEQ6IPM2 695 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 COL23A1Q86Y22 540 aaPredicted RBP24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 C2CD5Q86YS7 1000 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 TRIM58Q8NG06 486 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 CAGE1Q8TC20 777 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 AKT1S1Q96B36 256 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 VIPAS39Q9H9C1 493 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 JMJD4Q9H9V9 463 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 FAM207AQ9NSI2 230 aaPredicted RBP24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 ARHGAP20Q9P2F6 1191 aa24.42■■□□□ 1.5
NKX2-4-201ENST00000351817 LCA5LO95447 670 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 PLEKP08567 350 aaPredicted RBP24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 CCDC96Q2M329 555 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 FAM71BQ8TC56 605 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 NUDT12Q9BQG2 462 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 IFIH1Q9BYX4 1025 aaKnown RBP24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 MMRN2Q9H8L6 949 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 NRXN2Q9P2S2 1712 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 TACC1O75410 805 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 GTF2IP78347 998 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 SEPT2Q15019 361 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 LRRC55Q6ZSA7 311 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 KRT26Q7Z3Y9 468 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 JADE2Q9NQC1 790 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 JRKLQ9Y4A0 524 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 PCDHA13Q9Y5I0 950 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 C10orf71Q711Q0 1435 aa24.41■■□□□ 1.5
NKX2-4-201ENST00000351817 MYO3BQ8WXR4 1341 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 LRRIQ3A6PVS8 624 aaPredicted RBP24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 PLSCR1O15162 318 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 EPHB6O15197 1021 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 CLK2P49760 499 aaKnown RBP24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 KIF11P52732 1056 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 EIF6P56537 245 aaKnown RBP24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 ADGRF4Q8IZF3 695 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 EDEM3Q9BZQ6 932 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 SH2D4AQ9H788 454 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 MED4Q9NPJ6 270 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 RNF216Q9NWF9 866 aaPredicted RBP24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 SWAP70Q9UH65 585 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 SUGT1Q9Y2Z0 365 aa24.4■■□□□ 1.5
NKX2-4-201ENST00000351817 PPEF1O14829 653 aaPredicted RBP24.39■■□□□ 1.5
NKX2-4-201ENST00000351817 N4BP1O75113 896 aaKnown RBP24.39■■□□□ 1.5
NKX2-4-201ENST00000351817 EIF4A3P38919 411 aaKnown RBP24.39■■□□□ 1.5
NKX2-4-201ENST00000351817 AEBP2Q6ZN18 517 aaPredicted RBP24.39■■□□□ 1.5
NKX2-4-201ENST00000351817 KCNK18Q7Z418 384 aa24.39■■□□□ 1.5
NKX2-4-201ENST00000351817 SP8Q8IXZ3 490 aa24.39■■□□□ 1.5
NKX2-4-201ENST00000351817 CUL5Q93034 780 aa24.39■■□□□ 1.5
NKX2-4-201ENST00000351817 DEF6Q9H4E7 631 aa24.39■■□□□ 1.5
NKX2-4-201ENST00000351817 DDX25Q9UHL0 483 aaKnown RBP24.39■■□□□ 1.5
NKX2-4-201ENST00000351817 LMAN1P49257 510 aa24.39■■□□□ 1.49
NKX2-4-201ENST00000351817 MRPL12P52815 198 aaKnown RBP24.39■■□□□ 1.49
NKX2-4-201ENST00000351817 UBE2SQ16763 222 aa24.39■■□□□ 1.49
NKX2-4-201ENST00000351817 MUM1L1Q5H9M0 696 aa24.39■■□□□ 1.49
NKX2-4-201ENST00000351817 CCDC102AQ96A19 550 aa24.39■■□□□ 1.49
NKX2-4-201ENST00000351817 GCFC2P16383 781 aaKnown RBP24.38■■□□□ 1.49
NKX2-4-201ENST00000351817 MYOCDQ8IZQ8 938 aa24.38■■□□□ 1.49
NKX2-4-201ENST00000351817 SERPINB13Q9UIV8 391 aa24.38■■□□□ 1.49
NKX2-4-201ENST00000351817 SNX12Q9UMY4 172 aa24.38■■□□□ 1.49
NKX2-4-201ENST00000351817 FAN1Q9Y2M0 1017 aa24.38■■□□□ 1.49
NKX2-4-201ENST00000351817 ZNF185O15231 689 aa24.38■■□□□ 1.49
NKX2-4-201ENST00000351817 RRAGAQ7L523 313 aa24.38■■□□□ 1.49
NKX2-4-201ENST00000351817 CLEC10AQ8IUN9 316 aa24.38■■□□□ 1.49
NKX2-4-201ENST00000351817 LRRC53A6NM62 1247 aa24.37■■□□□ 1.49
NKX2-4-201ENST00000351817 PDE2AO00408 941 aaPredicted RBP24.37■■□□□ 1.49
NKX2-4-201ENST00000351817 AKR1B10O60218 316 aa24.37■■□□□ 1.49
NKX2-4-201ENST00000351817 PPP1R11O60927 126 aaPredicted RBP24.37■■□□□ 1.49
NKX2-4-201ENST00000351817 PRLRP16471 622 aa24.37■■□□□ 1.49
NKX2-4-201ENST00000351817 GPATCH4Q5T3I0 446 aaKnown RBP24.37■■□□□ 1.49
NKX2-4-201ENST00000351817 ARHGAP27Q6ZUM4 889 aa24.37■■□□□ 1.49
NKX2-4-201ENST00000351817 TMC4Q7Z404 712 aa24.37■■□□□ 1.49
NKX2-4-201ENST00000351817 NLGN1Q8N2Q7 840 aa24.37■■□□□ 1.49
NKX2-4-201ENST00000351817 HAS1Q92839 578 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms