RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CSGALNACT2Q8N6G5 542 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 ZBED3Q96IU2 234 aaPredicted RBP18.66■□□□□ 0.58
SAMM50-201ENST00000350028 VEZTQ9HBM0 779 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 A0A1W2PQC6 194 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 SPDYE3A6NKU9 549 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 RRP9O43818 475 aaKnown RBP18.66■□□□□ 0.58
SAMM50-201ENST00000350028 FCER1AP12319 257 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 FECHP22830 423 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 SREBF1P36956 1147 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 STAT2P52630 851 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 USH1GQ495M9 461 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 Q4G0T1 1027 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 ANKRD40Q6AI12 368 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 CREBRFQ8IUR6 639 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 NLGN2Q8NFZ4 835 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 CPLX3Q8WVH0 158 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 PPP1R1BQ9UD71 204 aaPredicted RBP18.66■□□□□ 0.58
SAMM50-201ENST00000350028 STK24Q9Y6E0 443 aa18.66■□□□□ 0.58
SAMM50-201ENST00000350028 PHLPP2Q6ZVD8 1323 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 LGALS16A8MUM7 142 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 GYPCP04921 128 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 CASP14P31944 242 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 ECE1P42892 770 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 UBXN1Q04323 297 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 CXCL9Q07325 125 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 SYT10Q6XYQ8 523 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 MB21D1Q8N884 522 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 KIAA0895Q8NCT3 520 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 ACER1Q8TDN7 264 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 CHURC1Q8WUH1 139 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 SH2D4AQ9H788 454 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 CD2APQ9Y5K6 639 aa18.65■□□□□ 0.58
SAMM50-201ENST00000350028 PIK3CDO00329 1044 aa18.64■□□□□ 0.57
SAMM50-201ENST00000350028 PLA2G6O60733 806 aa18.64■□□□□ 0.57
SAMM50-201ENST00000350028 CIITAP33076 1130 aa18.64■□□□□ 0.57
SAMM50-201ENST00000350028 DNM2P50570 870 aa18.64■□□□□ 0.57
SAMM50-201ENST00000350028 CIAPIN1Q6FI81 312 aa18.64■□□□□ 0.57
SAMM50-201ENST00000350028 CENPPQ6IPU0 288 aa18.64■□□□□ 0.57
SAMM50-201ENST00000350028 KCNK18Q7Z418 384 aa18.64■□□□□ 0.57
SAMM50-201ENST00000350028 SPICE1Q8N0Z3 855 aa18.64■□□□□ 0.57
SAMM50-201ENST00000350028 GUF1Q8N442 669 aaKnown RBP18.64■□□□□ 0.57
SAMM50-201ENST00000350028 DDX12PQ92771 950 aa18.64■□□□□ 0.57
SAMM50-201ENST00000350028 BMP2KQ9NSY1 1161 aaPredicted RBP18.64■□□□□ 0.57
SAMM50-201ENST00000350028 CAP2P40123 477 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 MAP3K10Q02779 954 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 ECM1Q16610 540 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 TRIM65Q6PJ69 517 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 DYMQ7RTS9 669 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 FAM160B2Q86V87 743 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 ZNF507Q8TCN5 953 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 TSC1Q92574 1164 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 FAM20AQ96MK3 541 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 P2RX7Q99572 595 aaKnown RBP18.63■□□□□ 0.57
SAMM50-201ENST00000350028 VCPKMTQ9H867 229 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 SLC39A2Q9NP94 309 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 FGFR1OPO95684 399 aaKnown RBP18.63■□□□□ 0.57
SAMM50-201ENST00000350028 CYP3A4P08684 503 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.57
SAMM50-201ENST00000350028 EHHADHQ08426 723 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 DALRD3Q5D0E6 543 aaKnown RBP18.63■□□□□ 0.57
SAMM50-201ENST00000350028 FAM83BQ5T0W9 1011 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 FOXR2Q6PJQ5 311 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 TMTC1Q8IUR5 882 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 ETNPPLQ8TBG4 499 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 TMEM39BQ9GZU3 492 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 PGAP2Q9UHJ9 254 aa18.63■□□□□ 0.57
SAMM50-201ENST00000350028 OPLAHO14841 1288 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 CCDC175P0C221 793 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 IDEP14735 1019 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 TNIP1Q15025 636 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 KIAA1755Q5JYT7 1200 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 HAUS3Q68CZ6 603 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 TOGARAM2Q6ZUX3 1019 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 ERMNQ8TAM6 284 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 JDP2Q8WYK2 163 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 GJA10Q969M2 543 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 TUBGCP2Q9BSJ2 902 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 SEMA6BQ9H3T3 888 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 L2HGDHQ9H9P8 463 aa18.62■□□□□ 0.57
SAMM50-201ENST00000350028 PRR16Q569H4 304 aa18.61■□□□□ 0.57
SAMM50-201ENST00000350028 DNAJC19Q96DA6 116 aa18.61■□□□□ 0.57
SAMM50-201ENST00000350028 CNOT6LQ96LI5 555 aaKnown RBP18.61■□□□□ 0.57
SAMM50-201ENST00000350028 RANBP17Q9H2T7 1088 aaKnown RBP18.61■□□□□ 0.57
SAMM50-201ENST00000350028 DNAI1Q9UI46 699 aa18.61■□□□□ 0.57
SAMM50-201ENST00000350028 KIAA1024Q9UPX6 916 aa18.61■□□□□ 0.57
SAMM50-201ENST00000350028 SOWAHDA6NJG2 315 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 WNT10BO00744 389 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 LRRC63Q05C16 580 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 HSP90AA2PQ14568 343 aaPredicted RBP18.6■□□□□ 0.57
SAMM50-201ENST00000350028 RAD9BQ6WBX8 426 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 HPS3Q969F9 1004 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 NUP58Q9BVL2 599 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 PDCL3Q9H2J4 239 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 TAOK3Q9H2K8 898 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 MYOZ2Q9NPC6 264 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 ABHD10Q9NUJ1 306 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 FEM1BQ9UK73 627 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 SLU7O95391 586 aaKnown RBP18.6■□□□□ 0.57
SAMM50-201ENST00000350028 ASNSP08243 561 aa18.6■□□□□ 0.57
SAMM50-201ENST00000350028 PLA2G4BP0C869 781 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms