RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 NAPAP54920 295 aa25.41■■□□□ 1.66
SNX3-202ENST00000349379 BEX3Q00994 111 aa25.41■■□□□ 1.66
SNX3-202ENST00000349379 FSCN1Q16658 493 aaKnown RBP25.41■■□□□ 1.66
SNX3-202ENST00000349379 SEPT14Q6ZU15 432 aa25.41■■□□□ 1.66
SNX3-202ENST00000349379 PHKBQ93100 1093 aa25.41■■□□□ 1.66
SNX3-202ENST00000349379 RIC8AQ9NPQ8 531 aa25.41■■□□□ 1.66
SNX3-202ENST00000349379 TPCN1Q9ULQ1 816 aa25.41■■□□□ 1.66
SNX3-202ENST00000349379 DNAH12Q6ZR08 3092 aa25.41■■□□□ 1.66
SNX3-202ENST00000349379 LTBP2Q14767 1821 aa25.4■■□□□ 1.66
SNX3-202ENST00000349379 H0YGN5 161 aa25.4■■□□□ 1.66
SNX3-202ENST00000349379 TXNP10599 105 aaKnown RBP25.4■■□□□ 1.66
SNX3-202ENST00000349379 MYCLP12524 364 aaPredicted RBP25.4■■□□□ 1.66
SNX3-202ENST00000349379 CCND2P30279 289 aa25.4■■□□□ 1.66
SNX3-202ENST00000349379 ATN1P54259 1190 aaPredicted RBP25.4■■□□□ 1.66
SNX3-202ENST00000349379 MRPS9P82933 396 aaKnown RBP25.4■■□□□ 1.66
SNX3-202ENST00000349379 ANKRD1Q15327 319 aa25.4■■□□□ 1.66
SNX3-202ENST00000349379 UBE2SQ16763 222 aa25.39■■□□□ 1.66
SNX3-202ENST00000349379 C7orf61Q8IZ16 206 aa25.39■■□□□ 1.66
SNX3-202ENST00000349379 COPS5Q92905 334 aa25.39■■□□□ 1.66
SNX3-202ENST00000349379 DDX41Q9UJV9 622 aaKnown RBP25.39■■□□□ 1.66
SNX3-202ENST00000349379 ELP1O95163 1332 aa25.38■■□□□ 1.65
SNX3-202ENST00000349379 ESYT2A0FGR8 921 aa25.38■■□□□ 1.65
SNX3-202ENST00000349379 STAM2O75886 525 aa25.38■■□□□ 1.65
SNX3-202ENST00000349379 RTP1P59025 263 aa25.38■■□□□ 1.65
SNX3-202ENST00000349379 PCNX4Q63HM2 1172 aa25.38■■□□□ 1.65
SNX3-202ENST00000349379 OR6J1Q8NGC5 347 aa25.38■■□□□ 1.65
SNX3-202ENST00000349379 KIF2CQ99661 725 aa25.38■■□□□ 1.65
SNX3-202ENST00000349379 SMCO2A6NFE2 343 aa25.37■■□□□ 1.65
SNX3-202ENST00000349379 PFKFB2O60825 505 aa25.37■■□□□ 1.65
SNX3-202ENST00000349379 RBM25P49756 843 aaKnown RBP25.37■■□□□ 1.65
SNX3-202ENST00000349379 CLK2P49760 499 aaKnown RBP25.37■■□□□ 1.65
SNX3-202ENST00000349379 SCRN1Q12765 414 aa25.37■■□□□ 1.65
SNX3-202ENST00000349379 XRRA1Q6P2D8 792 aa25.37■■□□□ 1.65
SNX3-202ENST00000349379 GLT1D1Q96MS3 346 aa25.37■■□□□ 1.65
SNX3-202ENST00000349379 INPP4AQ96PE3 977 aaPredicted RBP25.37■■□□□ 1.65
SNX3-202ENST00000349379 SLC26A6Q9BXS9 759 aa25.37■■□□□ 1.65
SNX3-202ENST00000349379 ZMYND12Q9H0C1 365 aa25.37■■□□□ 1.65
SNX3-202ENST00000349379 GLT8D2Q9H1C3 349 aa25.37■■□□□ 1.65
SNX3-202ENST00000349379 STARD7Q9NQZ5 370 aa25.37■■□□□ 1.65
SNX3-202ENST00000349379 A6NJR5 290 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 ADCY7P51828 1080 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 NEK4P51957 841 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 AKAP17AQ02040 695 aaKnown RBP25.36■■□□□ 1.65
SNX3-202ENST00000349379 ARHGAP1Q07960 439 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 STK3Q13188 491 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 LY6KQ17RY6 165 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 KCNV1Q6PIU1 500 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 EMID1Q96A84 441 aaPredicted RBP25.36■■□□□ 1.65
SNX3-202ENST00000349379 PCDHA6Q9UN73 950 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 PCDHA8Q9Y5H6 950 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 MRVI1Q9Y6F6 885 aa25.36■■□□□ 1.65
SNX3-202ENST00000349379 SPDYE3A6NKU9 549 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 ZEB2O60315 1214 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 CABYRO75952 493 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 TGFB3P10600 412 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 ICAM3P32942 547 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 CPT1AP50416 773 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 TRIM60Q495X7 471 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 CXCL17Q6UXB2 119 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 ZFP91Q96JP5 570 aaPredicted RBP25.35■■□□□ 1.65
SNX3-202ENST00000349379 C22orf23Q9BZE7 217 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 SLKQ9H2G2 1235 aaPredicted RBP25.35■■□□□ 1.65
SNX3-202ENST00000349379 GTF3C3Q9Y5Q9 886 aa25.35■■□□□ 1.65
SNX3-202ENST00000349379 CPLX1O14810 134 aa25.34■■□□□ 1.65
SNX3-202ENST00000349379 PPFIA3O75145 1194 aa25.34■■□□□ 1.65
SNX3-202ENST00000349379 GH1P01241 217 aa25.34■■□□□ 1.65
SNX3-202ENST00000349379 CPLX2Q6PUV4 134 aaKnown RBP25.34■■□□□ 1.65
SNX3-202ENST00000349379 TRIM22Q8IYM9 498 aa25.34■■□□□ 1.65
SNX3-202ENST00000349379 CCDC12Q8WUD4 166 aaPredicted RBP25.34■■□□□ 1.65
SNX3-202ENST00000349379 FOSP01100 380 aaPredicted RBP25.33■■□□□ 1.65
SNX3-202ENST00000349379 CDK7P50613 346 aa25.33■■□□□ 1.65
SNX3-202ENST00000349379 PURAQ00577 322 aaKnown RBP25.33■■□□□ 1.65
SNX3-202ENST00000349379 SSRP1Q08945 709 aaKnown RBP25.33■■□□□ 1.65
SNX3-202ENST00000349379 SEMA3FQ13275 785 aa25.33■■□□□ 1.65
SNX3-202ENST00000349379 AP3B2Q13367 1082 aa25.33■■□□□ 1.65
SNX3-202ENST00000349379 ME3Q16798 604 aa25.33■■□□□ 1.65
SNX3-202ENST00000349379 GNPTABQ3T906 1256 aa25.33■■□□□ 1.65
SNX3-202ENST00000349379 ANKRD33Q7Z3H0 272 aa25.33■■□□□ 1.65
SNX3-202ENST00000349379 SLC43A3Q8NBI5 491 aa25.33■■□□□ 1.65
SNX3-202ENST00000349379 POLR3EQ9NVU0 708 aa25.33■■□□□ 1.65
SNX3-202ENST00000349379 ATP11BQ9Y2G3 1177 aa25.33■■□□□ 1.65
SNX3-202ENST00000349379 A0A0U1RQG5 324 aaPredicted RBP25.32■■□□□ 1.64
SNX3-202ENST00000349379 DEXIO95424 95 aa25.32■■□□□ 1.64
SNX3-202ENST00000349379 LARGE1O95461 756 aa25.32■■□□□ 1.64
SNX3-202ENST00000349379 SP2Q02086 613 aa25.32■■□□□ 1.64
SNX3-202ENST00000349379 TOX2Q96NM4 488 aa25.32■■□□□ 1.64
SNX3-202ENST00000349379 SH3GLB2Q9NR46 395 aa25.32■■□□□ 1.64
SNX3-202ENST00000349379 ZMYND8Q9ULU4 1186 aaPredicted RBP25.32■■□□□ 1.64
SNX3-202ENST00000349379 GRIN2DO15399 1336 aa25.32■■□□□ 1.64
SNX3-202ENST00000349379 STK36Q9NRP7 1315 aa25.32■■□□□ 1.64
SNX3-202ENST00000349379 SPATA31C2B4DYI2 1134 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 ADAMTS3O15072 1205 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 FIBPO43427 364 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 UBA1P22314 1058 aaKnown RBP25.31■■□□□ 1.64
SNX3-202ENST00000349379 TLE2Q04725 743 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 BRDTQ58F21 947 aaPredicted RBP25.31■■□□□ 1.64
SNX3-202ENST00000349379 CCDC148Q8NFR7 591 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 AFG1LQ8WV93 481 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 ANO3Q9BYT9 981 aa25.31■■□□□ 1.64
SNX3-202ENST00000349379 EHMT1Q9H9B1 1298 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms